Gene Saro_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1410 
Symbol 
ID3916074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1453782 
End bp1454807 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content63% 
IMG OID640444153 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_496688 
Protein GI87199431 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.308974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTACC GGGTTGTAGT GGTCGGTGCG ACTGGGAATG TGGGCCGCGA GATGCTCAAC 
ATTCTGGCCG AGCGCGAGTT TCCCTGCGAC GAGATCGCAG CGGTTGCTTC GTCGCGGTCG 
CAGGGCACCG AGATCGAGTT TGGCGAGACC GGCCGCAAGC TGAAGGTCCA GAACGTCGAG 
AACTTCGATT TCACCGGATG GGACATCGCA CTGTTCGCGG CCGGATCCGG CCCGACGCAG 
ATCCACGCCC CGCGTGCCGC TTCGCAGGGC TGCGTGGTGA TCGACAACTC GTCGCTCTAC 
CGCATGGACC CGGACGTGCC GCTGATCGTG CCCGAGGTGA ACCCGGACGC GATCGACGGC 
TACACCAAGA AGAACATCAT CGCCAACCCG AACTGCTCGA CCGCGCAAAT GGTCGTGGCG 
CTGAAGCCGC TGCATGATGC CGCCAAGATC AAGCGCGTCG TCGTCTCCAC CTACCAGTCG 
GTTTCCGGCG CGGGCAAGGA AGGCATGGAC GAGCTGTTCG AACAGAGCCG CGCGATCTTC 
GTCGGCGACC CGGTGGAGCC GAAGAAGTTC ACCAAGCAGA TCGCCTTCAA CGTGATCCCG 
CACATCGACG TCTTCCTCGA CGATGGATCG ACCAAGGAAG AGTGGAAGAT GGTCGCCGAG 
ACCAAGAAGA TCCTCGACCC CAAGGTCAAG GTAACGGCAA CCTGCGTGCG TGTGCCGGTG 
TTCATCGGCC ACTCGGAAGC GCTGAACATC GAGTTCGAGA ACGAGATTTC GGCCGAGGAA 
GCGCAGAACA TCCTGCGCGA GGCCCCGGGC GTGATGCTCG TCGACAAGCG CGAGAACGGC 
GGATACGTGA CGCCGGTCGA ATGCGTTGGC GACTTTGCCA CCTTCGTTTC GCGCGTGCGT 
GAGGATTCGA CCGTGGACAA CGGCCTGAAC ATCTGGTGCG TCTCGGACAA CCTGCGCAAG 
GGTGCGGCCC TGAACGCCGT CCAGATCGCC GAACTGCTCG GCCGTCGCCA CCTCAAGAAG 
GGCTGA
 
Protein sequence
MGYRVVVVGA TGNVGREMLN ILAEREFPCD EIAAVASSRS QGTEIEFGET GRKLKVQNVE 
NFDFTGWDIA LFAAGSGPTQ IHAPRAASQG CVVIDNSSLY RMDPDVPLIV PEVNPDAIDG 
YTKKNIIANP NCSTAQMVVA LKPLHDAAKI KRVVVSTYQS VSGAGKEGMD ELFEQSRAIF 
VGDPVEPKKF TKQIAFNVIP HIDVFLDDGS TKEEWKMVAE TKKILDPKVK VTATCVRVPV 
FIGHSEALNI EFENEISAEE AQNILREAPG VMLVDKRENG GYVTPVECVG DFATFVSRVR 
EDSTVDNGLN IWCVSDNLRK GAALNAVQIA ELLGRRHLKK G