Gene Saro_1406 details

Gene Information

• Locus tag: Saro_1406
• ID: 3916070
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1449504
• End bp: 1450004
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640444149
• Product: 16S rRNA processing protein RimM
• Protein accession: YP_496684
• Protein GI: 87199427
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.502149
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGCGACC GGCCCGTCAC GCTCGCCGCC ATTACCGGCG CGCATGGAGT GGCGGGCGAG 
GTCCGCTTGA AGCTGTTCGG TGAAGGCGTG GCGGCGCTGA AGCGCTACCG CGCCTTCAAC 
GATTCAGGCG ATGGTTCCGG GCTGACCGTG GTGAAGATCA AGGACGACGG CAAGGGTGGC 
GCGATTGCCC GCTTTGCCGA AGTGCCCGAT CGCACGGCGG CGGAGAAGCT GCGCGGCACG 
GCGCTGACCG TGCGCCGGTC GGAATTGCCC TCTCTGCCCG AGGGCGAGTA TTACCACGCC 
GACCTGATCG GCCTGCCTGC GGTCTCGACC GAGGGCGAGA TGCTCGGCGA GTGCATCGCG 
GTCGAGAACT TCGGCGCGGG CGACGTGATC GAGATCCGCA AGGCCGACGG CAAGAAGTTC 
ATGGTGCCGA TGAAGACGGA AGCGGTTCCG GAATGGACCG ACGAGCGGAT TGTCATTGAA 
GCGGCTTACG CTGACCAATG A 

 

Protein sequence

MRDRPVTLAA ITGAHGVAGE VRLKLFGEGV AALKRYRAFN DSGDGSGLTV VKIKDDGKGG 
AIARFAEVPD RTAAEKLRGT ALTVRRSELP SLPEGEYYHA DLIGLPAVST EGEMLGECIA 
VENFGAGDVI EIRKADGKKF MVPMKTEAVP EWTDERIVIE AAYADQ