Gene Saro_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1398 
Symbol 
ID3917853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp1441218 
End bp1441790 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content62% 
IMG OID640444141 
Producthypothetical protein 
Protein accessionYP_496676 
Protein GI87199419 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0259428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGC TCTTCGGCAA TCTGCATCTT GTTCTTGTGG TCGGCCTTGT CGCCGCGATC 
GCCGTCATGT TCGGCTATGC CGACTCCGCG GTGGTCGACA CCAACTCCAT CTTCCGCTGG 
CTGCACGTGT TCTTCGGCAT CCTGTGGATC GGCCTGCTCT ACTACCTGAA CTTCGTCCAG 
GTCCCGACCA TGCCGTCGAT CCCTGCCGAA CAGAAGGGCG CGATCACCGG CCACATCGCG 
CCGAAGGTAT TCTTCTTCTT CCGCTACGCC GCGCTGCTGA CGGTCGTCAC CGGCCTCGTC 
ATCGCTTTCG TCTCGGGCTA TGGCCACGCG GCGATGACTT TCTCGGGCGA AGGCAACGTC 
AACCTCATCG GGCTCGGCAT GTGGCTGGCG CTGATCATGG CGTTCAACGT GTGGTTCATC 
ATCTGGCCCG CCCAGAAGAA GATCCTCGGC ATCGTCGAAG CCTCGGCCGA GGAAAAGGCC 
GCTGCCGCGC CGCGCGCCCT GATCGCCAGC CGTACCAACC TGCTGCTGTC GCTGCCGATG 
CTCTACTGCA TGGTAAGCGC GAACCTCGGC TGA
 
Protein sequence
MAKLFGNLHL VLVVGLVAAI AVMFGYADSA VVDTNSIFRW LHVFFGILWI GLLYYLNFVQ 
VPTMPSIPAE QKGAITGHIA PKVFFFFRYA ALLTVVTGLV IAFVSGYGHA AMTFSGEGNV 
NLIGLGMWLA LIMAFNVWFI IWPAQKKILG IVEASAEEKA AAAPRALIAS RTNLLLSLPM 
LYCMVSANLG