Gene Saro_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1395 
Symbol 
ID3917850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1439353 
End bp1440267 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID640444138 
Productsignal transduction histidine kinase 
Protein accessionYP_496673 
Protein GI87199416 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.695001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTGCC GTTTCCGGGG CGATGGCACG ATCCTGTTCG TCAACCGCGC CTATGCGGAT 
ACGCTCGGCA GCGATCCGGT ATCGCTGACC GGGCGCAATC TGTGGGACTT CGTCAGTGGC
GAGGACCGGG CCCACGTCGG GCAGATGCTT GAACGTCTCA CCCCGGAAGA GCCCGAACTG
ACCATCGAAA ACAGGTTCGA GACCGCGGGC GGAGCGCGCT GGACGCTGTG GCGCAATCAC
GCGCTTTCGT TCGACGACTG GGGCAACTGG TCTGTGGCGC AGTCCACCGG CATCGACATC
ACCGAACGCA AGATGCTCGA GGAGCAGCTC GAACTGCTGG TTGGCGAACT GAACCACCGC
GTGAAGAACA CGTTGATGGT CGTCCAGGCC ATGGCCTACC AGACCTTCCG TGGGGCAGGG
CTGCCGGAAC AGCCCGTCGC CTCGTTCAAT CAGAGGCTGG CCGCGCTTTC GGGCGCGCAT
GACGCGCTCA GCCGGGCGAA CTGGTCGGGG ACGGCTCTGG CCGATATCGT GCGCGAGGGA
CTGCTCATAT GCGGCGATTC CGACCCGCGC ATCTCGGTGA GCGGCCCCGA TGTCCTGATA
CCGGCGAACG CGACCGTGTC GCTCGTCATG GTCCTTCACG AACTGGCCAC CAACGCCACC
AAGTACGGCG CGCTGTCGGT CGATGGCGGA TCGGTTGCCA TAGACTGGAA CTACGATCCG
CCGGGCGAAT GGCTGGTCCT CGAATGGAAG GAACGTGGCG GACCGGCAGT GGTCGCACCG
TCCCGCAAGG GCTTCGGCTC GCGCCTCGTG ACAGAGGCGG TGCCGCGCCA GCTCGGCGGC
AAGGTCGAAA TGCATTACGA ATGGGAAGGC TTGCACTGCC GCATCGCCTT CCCGCTGACG
GGAACGGGGC AATGA
 
Protein sequence
MVCRFRGDGT ILFVNRAYAD TLGSDPVSLT GRNLWDFVSG EDRAHVGQML ERLTPEEPEL 
TIENRFETAG GARWTLWRNH ALSFDDWGNW SVAQSTGIDI TERKMLEEQL ELLVGELNHR
VKNTLMVVQA MAYQTFRGAG LPEQPVASFN QRLAALSGAH DALSRANWSG TALADIVREG
LLICGDSDPR ISVSGPDVLI PANATVSLVM VLHELATNAT KYGALSVDGG SVAIDWNYDP
PGEWLVLEWK ERGGPAVVAP SRKGFGSRLV TEAVPRQLGG KVEMHYEWEG LHCRIAFPLT
GTGQ