| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1390 |
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| Symbol | |
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| ID | 3917845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1433437 |
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| End bp | 1435404 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640444133 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_496668 |
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| Protein GI | 87199411 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.74825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCTG AACTCGGTCT TGCCGTCCTG TGGATGGCGG CGGCGCTTGC CGCCTTGCAG
CTTTTCGCCG GCGTTTCGGC CCTGCGCCCA GGCGGCGGGG CGGCGGGCAA GTCGCTCGCC
GGCATGGTTC GCCCGCTAGC TGTCATGCAG GGTGCGCTCG TCGCGATCTC GTTCCTGGCG
CTGATCGACT TGTTCCTGGA AACGGACCTG TCGGTGAAGC TCGTGGCGGA AAACAGCCAC
TCGATGAAGC CGTTCATCTT CAAGCTGGCG GGTACGTGGG GCAACCACGA AGGCTCGATG
CTGCTGTGGG TGACGATCAT GGCGGTATCG GGCGGTTTCG TCGCGCTCAT CGAGAAGCGC
CTGCGCGAAG ACACGCTGAT CGCCACGCTG GCGGGGCAGG CCTTCGTCAG CCTCGGCTTC
TATGCCTTCC TGCTGTTCTC CTCGAACCCG TTCGAGCGAC TGGCGGAACC AGCGCCTGAT
GGTGCCGGCC TCAACCCGCT GCTGCAGGAC ATCGGCCTCG CATTTCATCC GCCCACGCTC
TACGTCGGTT ATGTCGGGCT TTCGGTGGCG TTCAGCTTTG CCATCGGCGC GCTGATCACG
CGTGACGTCG GCCCCGCTTT CGCCCGCGCG ATGCGCCCCT GGGTGCTGGG CGCGTGGATT
TTCCTCACCA TCGGCATCAC GGCCGGTTCC TACTGGGCCT ACTACACGCT CGGCTGGGGT
GGCTGGTGGT TCTGGGACCC TGTCGAGAAC GCCTCGCTCA TGCCCTGGCT GGCCGCGACG
GCATTGCTTC ACTCGGCCTC CGTCCTTGCC AGTCGCAACG CCTTGCGCGC GTGGACGGTG
ATGCTTGGCG TGATCGCCTT TTCGATGTCG ATGGTCGGCA CCTTCCTGGT GCGCTCGGGC
ATCCTGACGT CGGTCCATGC TTTCGCCGTC GATCCGGAAC GCGGCTCGTT CATCCTTGCG
CTTCTGGCCA TCTACATCGG CGGTGCATTG GCACTCTTCG GCCTGCGCGC GTCGACCGTG
ACCGAGGGTG AACGTTTCAG CCTGTTCAGC CGTGAGGCGA GCCTCGTGTT CAACAACGTG
ATGCTCTGCG GCACGCTCGG CATCGTGCTG ATCGGCACGC TCTACCCACT GCTGACCGAA
GCGTTCGGTG CCAAGGTTTC GGTGGGACCT CCCTATTTCA ATCCGGTATC CGCGATCTTC
GTGATTCCGA TGATGCTCGT CATGGGCGTC GGGCCGCTGC TTCGCTGGCG CAAGGACAAG
CCAGGCCGCG TGACCGGCAG TGTCGCGGTG CCTGCGCTGC TCACCGCGCT CGTCCTGCTC
GCCGTCGTGG TCCTGGCCCC CGGCATTCGC ATCCTGCCCG CGCTCGGCCT TGCGGTTGGC
GCCGGGTTGG CGCTGGCGAG CTGGTTCCCG CTCAGGGGCC GCAACCTGCG CCGCACGCCG
CTCAGCGTCT GGGGCATGGT CTTCGGCCAC TTCGGCATTG CCGTCGCCTT GCTCGGCGCT
GCCAGCGAAA GCGCATTCTC GACCGAACGG CTGGCCGCGA TGAATGTGGG CGATACGCAA
AGCGTCGGTC CGATCTCGCT CAAGCTCGAG AAGATCGAAC CTGTCGCCGG CCCCAACTGG
ACCGCGCTCG AGGCAACGGT CAGCGCATCG TACAAGGGCG GGGCGCCGGT CACGCTGCAT
CCGCAGGCGC GCACCTTCTC CTCGCCGCCT GGCGAGCGTA CCGAATCCGC ACTCCATACG
CGCTGGAACG GCCAGCTCTA TGCCGTGCTC GGCAACGAGG GCGAGGATGG CCGCTGGCAG
ATGCGCTTCT GGTGGAAGCC GTTCGTGCCG CTGCTCTGGC TCGGCGGGCT GCTGATTGCG
TTTGGCGGCG TTCTGGCGCT TCTGGGCCGG GTGGCGCATG ATGTTCGCCG CCTGCGCGCA
GGCGGCAAGA TTGCATATCG CCGGGCCCGG ATGGAGCAGG TGAAGTGA
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| Protein sequence | MIAELGLAVL WMAAALAALQ LFAGVSALRP GGGAAGKSLA GMVRPLAVMQ GALVAISFLA
LIDLFLETDL SVKLVAENSH SMKPFIFKLA GTWGNHEGSM LLWVTIMAVS GGFVALIEKR
LREDTLIATL AGQAFVSLGF YAFLLFSSNP FERLAEPAPD GAGLNPLLQD IGLAFHPPTL
YVGYVGLSVA FSFAIGALIT RDVGPAFARA MRPWVLGAWI FLTIGITAGS YWAYYTLGWG
GWWFWDPVEN ASLMPWLAAT ALLHSASVLA SRNALRAWTV MLGVIAFSMS MVGTFLVRSG
ILTSVHAFAV DPERGSFILA LLAIYIGGAL ALFGLRASTV TEGERFSLFS REASLVFNNV
MLCGTLGIVL IGTLYPLLTE AFGAKVSVGP PYFNPVSAIF VIPMMLVMGV GPLLRWRKDK
PGRVTGSVAV PALLTALVLL AVVVLAPGIR ILPALGLAVG AGLALASWFP LRGRNLRRTP
LSVWGMVFGH FGIAVALLGA ASESAFSTER LAAMNVGDTQ SVGPISLKLE KIEPVAGPNW
TALEATVSAS YKGGAPVTLH PQARTFSSPP GERTESALHT RWNGQLYAVL GNEGEDGRWQ
MRFWWKPFVP LLWLGGLLIA FGGVLALLGR VAHDVRRLRA GGKIAYRRAR MEQVK
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