Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1386 |
Symbol | |
ID | 3917840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1430763 |
End bp | 1431749 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640444128 |
Product | general secretion pathway protein K |
Protein accession | YP_496664 |
Protein GI | 87199407 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.729175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCAG GGGACCCGAA GGAGCGCGGT GCGGCACTGC TGTCCGTGTT GCTGCTGGTT GCGGTCATGG CGGTGATCGC GGCGGTTATG CTCGACCGGC TCAACCTTGC TGCGCGGCTT GCGGGCAACG GTCAGGCGAT GACTCAGGCG CGGCTTTACG CGACAAGCGC CGAAACGCTC GCGATGGCGC AGATCAAGGG GATGGTCGAC AGCTCGCAGG AGCGGACGGT GGACCGGCAA GGGCTGCTTG GCCGCGACTT CCCGCTGCCT CTGCCGCGCG GTACGGCGAT GGCGCGGGTG GAGGACGCGG GTAACTGCTT CAACCTGAAC TCGCTGGTCG AGGCCGATGC GCAAGGCGTT CTTGAGCTGC GGCTCGTCGG CCTCAACCAG ATGCGCGCGC TCATGACCGG CCTCGCCATT CCCGAAGCGG AAAGTGCGAT CATCAGCGAT TCGATCGCCG ACTGGATCGA CACCGACAAC CGGCCCGCCC CCAACGGTGC GGAGGACGAG ACCTACCAGG GTACGGCAAC GCCCTATCGC ACGGCCGGGC GGCTGATTGG CGACGTCAGC GAGATCCGCG CTGTGCGGGG AATGACGCCG CAATTCTACG AACGCCTGCG CCCCTGGCTC TGCGCGCTCC CGGCGGCGGA GCTTTCACCG ATCGACGTGA ACACCCTTCG GCCCGATCAG GCGCCGCTTC TAGCCATGCT CGCGCCCAAG GCCATCCCGG TCGATCGCGC CCGCGCCATG CTGTCCGGGC GGCCCGCGCT TGGCTGGGCA AGCGGTGACG AAGCCTTGCG CGGTTTCGGC GGAGAGGGAG CCGGGGGCGT ACCGCTCAAC CAGTTGCAGG TGCGCAGCCG CTGGTTCCTG TTGACGCTGA TGGTCACGGT CGATTCGGCG GTGGTCGAGG AGCAGGCGTT GATCGACGTC GGCGACAACC CTCCAAAAGT CGCCTTCCGT ACCTGGGGCG ACCGTTTCAG CCGTTAG
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Protein sequence | MSAGDPKERG AALLSVLLLV AVMAVIAAVM LDRLNLAARL AGNGQAMTQA RLYATSAETL AMAQIKGMVD SSQERTVDRQ GLLGRDFPLP LPRGTAMARV EDAGNCFNLN SLVEADAQGV LELRLVGLNQ MRALMTGLAI PEAESAIISD SIADWIDTDN RPAPNGAEDE TYQGTATPYR TAGRLIGDVS EIRAVRGMTP QFYERLRPWL CALPAAELSP IDVNTLRPDQ APLLAMLAPK AIPVDRARAM LSGRPALGWA SGDEALRGFG GEGAGGVPLN QLQVRSRWFL LTLMVTVDSA VVEEQALIDV GDNPPKVAFR TWGDRFSR
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