Gene Saro_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1386 
Symbol 
ID3917840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1430763 
End bp1431749 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content68% 
IMG OID640444128 
Productgeneral secretion pathway protein K 
Protein accessionYP_496664 
Protein GI87199407 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.729175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCAG GGGACCCGAA GGAGCGCGGT GCGGCACTGC TGTCCGTGTT GCTGCTGGTT 
GCGGTCATGG CGGTGATCGC GGCGGTTATG CTCGACCGGC TCAACCTTGC TGCGCGGCTT
GCGGGCAACG GTCAGGCGAT GACTCAGGCG CGGCTTTACG CGACAAGCGC CGAAACGCTC
GCGATGGCGC AGATCAAGGG GATGGTCGAC AGCTCGCAGG AGCGGACGGT GGACCGGCAA
GGGCTGCTTG GCCGCGACTT CCCGCTGCCT CTGCCGCGCG GTACGGCGAT GGCGCGGGTG
GAGGACGCGG GTAACTGCTT CAACCTGAAC TCGCTGGTCG AGGCCGATGC GCAAGGCGTT
CTTGAGCTGC GGCTCGTCGG CCTCAACCAG ATGCGCGCGC TCATGACCGG CCTCGCCATT
CCCGAAGCGG AAAGTGCGAT CATCAGCGAT TCGATCGCCG ACTGGATCGA CACCGACAAC
CGGCCCGCCC CCAACGGTGC GGAGGACGAG ACCTACCAGG GTACGGCAAC GCCCTATCGC
ACGGCCGGGC GGCTGATTGG CGACGTCAGC GAGATCCGCG CTGTGCGGGG AATGACGCCG
CAATTCTACG AACGCCTGCG CCCCTGGCTC TGCGCGCTCC CGGCGGCGGA GCTTTCACCG
ATCGACGTGA ACACCCTTCG GCCCGATCAG GCGCCGCTTC TAGCCATGCT CGCGCCCAAG
GCCATCCCGG TCGATCGCGC CCGCGCCATG CTGTCCGGGC GGCCCGCGCT TGGCTGGGCA
AGCGGTGACG AAGCCTTGCG CGGTTTCGGC GGAGAGGGAG CCGGGGGCGT ACCGCTCAAC
CAGTTGCAGG TGCGCAGCCG CTGGTTCCTG TTGACGCTGA TGGTCACGGT CGATTCGGCG
GTGGTCGAGG AGCAGGCGTT GATCGACGTC GGCGACAACC CTCCAAAAGT CGCCTTCCGT
ACCTGGGGCG ACCGTTTCAG CCGTTAG
 
Protein sequence
MSAGDPKERG AALLSVLLLV AVMAVIAAVM LDRLNLAARL AGNGQAMTQA RLYATSAETL 
AMAQIKGMVD SSQERTVDRQ GLLGRDFPLP LPRGTAMARV EDAGNCFNLN SLVEADAQGV
LELRLVGLNQ MRALMTGLAI PEAESAIISD SIADWIDTDN RPAPNGAEDE TYQGTATPYR
TAGRLIGDVS EIRAVRGMTP QFYERLRPWL CALPAAELSP IDVNTLRPDQ APLLAMLAPK
AIPVDRARAM LSGRPALGWA SGDEALRGFG GEGAGGVPLN QLQVRSRWFL LTLMVTVDSA
VVEEQALIDV GDNPPKVAFR TWGDRFSR