| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1385 |
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| Symbol | |
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| ID | 3917839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1430170 |
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| End bp | 1430766 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640444127 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_496663 |
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| Protein GI | 87199406 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.44929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA CGCCCGTCCG CAACGGCTTT ACGCTTGTCG AGATGCTGAT CGCGCTGGCG
CTTTTCGCGG TCATCGCGGT TGGCGCGCTC GGACTGCTGC GCTTTTCGGT CGATGCGGAG
CTGGCAAGCC GCGCCCGGAC CGAAACCATC GCGGCGCAGC GCCGGTTCCT CTCGGTGTGG
ACGGCGGACC TGGCGCAGGC CGTTCCACGC CCATCGCGCG ACCAGTCCGG CGCCCCCCAT
CCCGCATTCG AGGCAGGGAC GGACGGCGTG GTCATCCGCC TGACCCGCAG CGGCTGGGAC
AATCTTGACG GCGCCCCGCG TCCCGGCCTG CAGAAAGTCG AGTACCGCCT GACTGCCAAG
GCACTCGTGC GCTCCGGCTA CCCCTTTCCC GATGGCGCAT CGCCCGAACC TCCGGCCGAA
GTCCTGCCGA TCACCGGGCC CCCGACGGTG CGGTTCCGCA CGAAGGACGG CAATTGGCGC
GACCGGTGGG AACCCCAGCT CCAGACCGAG CTTCCGGTGG CGGTCGAACT GCTCCTGCCC
CAGGCCGGGG TGCCGCCGCT GCGCATCGTG TCTCTGGTCG GGGTGAACTA CCAGTGA
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| Protein sequence | MSETPVRNGF TLVEMLIALA LFAVIAVGAL GLLRFSVDAE LASRARTETI AAQRRFLSVW
TADLAQAVPR PSRDQSGAPH PAFEAGTDGV VIRLTRSGWD NLDGAPRPGL QKVEYRLTAK
ALVRSGYPFP DGASPEPPAE VLPITGPPTV RFRTKDGNWR DRWEPQLQTE LPVAVELLLP
QAGVPPLRIV SLVGVNYQ
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