| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1377 |
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| Symbol | |
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| ID | 3917831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1423743 |
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| End bp | 1426460 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640444119 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_496655 |
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| Protein GI | 87199398 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03303] outer membrane protein assembly complex, YaeT protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0662411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGAC GTAACGCGGT ACGTAACTTG CAGGCTCCGG GCCTGGGCGC GTTCCTGCTG
GCGACAACCG CGTTGGCCGT GGTTCCTTCC CTGGCGATGG CCCAGGCAGG CGGTCCTCCG
CCGCGTGGCG CACCGCCGCC GGGCGGCATG CGGGGCGAGC CGCCCGTGGC TCCGCCCGAA
GCGCGCGCTG TCGAGCCGGG TCCTGCCGCA CCCGAAGGCA CTCCCGCCGA GCAGATCATC
AAGTCGGTCA CCGTGCAGGG ATCGCAGCGT CTCGAGCCGG ATACCATCCT GTCCTATATC
CGTCTGCGTC CGGGCCAGGC CTATTCTCAG GCTGCCGCCG ACCAGGCGCT GAAGGATCTC
TACGCGACCG AGCTTTTCGC CGACGTCTCG ATCCGCAACA ACAGCGGCGA CGTTGTCGTG
CAGGTCAAGG AAAACCCGGT CATCAACCGC ATCATCCTTG AAGGCAACAA GCGCCTCAAG
GAAGACAAGA TCCTGCCCGA GATCAAGCTC GCGGCGCGCC AGATCTTCAC GCGTTCGAAG
GTCCGCGCAG ACGTTGCGCG CATCATCGAG TTGTACAAGC GCCAGGGGCG CTTCGCCGCG
ACGGTCGAGC CCAAGATGGT CATGCTCGAC CAGAATCGCG TCGACATCGT GTTCGAGATC
AGCGAGGGGC CGAAGTCCAA GGTTCGCCAG ATCAACATCA TCGGCAACGA GAAGTTCTCC
GACAGCGAGC TTCGCGGCGA GATGGTGACC AAGCAGGCGC GCTTCTTCCG GCTGTTCTCC
AGCGGTACCA GCTACGACCC GGACCGCCTC GCTTTCGACC AGCAGAAGCT GCGTCAGTTC
TACCTGACCG AAGGCTATGC CGATTTTCGT GTCGTCTCGG CCGTGGCCGA ACTCACGCCC
GACAAGCGCG ACTTCATCAT CACCTATGTG GTCGAGGAAG GCGAACGCTA CAAATTCGGC
GACGTGAAGG TCGACAGCCA GATTCGCGAC TTCGACAGCG AAGCGCTGGC CAAGCGCCTG
CCGATGAAGG CGGGCGACTG GTACAACGCA AAGATGGTCG AGGACCAGGT CGACGCACTC
ACCGAGACGG CGGGCGCGTT CGGCTATGCC TTTGCCGACG TGCGGCCCGA CTTCTCGCGC
AACAAGGACG ACCTGACGAT GTCGGTCAAC TTCCGCATCG CGGAAGCGCC ACGCGTCTAT
GTCGAGCGTG TCGACGTCAA CGGCAACACG CTGACCCAGG ACAAGGTCGT CCGCCGCGAG
TTCCGTCTGG CCGAAGGCGA TGCCTTCAAC ACCTTCCAGA TCAAGCGCTC GACCAACCGC
ATCAAGTCGC TCGGCTACTT CCAGGAGAAG TTCGAGATCG AGCAGAAGCC GGGCAGCGCT
CCGGACCGCA TCATCCTCGA AGCCAACGTT GAGGAACGGC CCACCGGCGA ACTCCAGCTT
TCGGCCGGCT TCTCGAGCCT CGAGAGCTTC ATCTTCCAGG GCTCTATCCG CCAGAACAAC
TTCCGCGGTC GTGGCCAGAC GATCGGCCTG TCGGTCGACT ATTCGCGTTA TACGCGTTCG
GTCCAGGTAA GCTTCACCGA GCCCTACCTG TTCGACAAGA ACATCTCGCT GGGCGTCGAC
GTCTACCGCC GCGACCTCAA CAGCTTCAAC TACTTCAACT CCGACCGCAA CACGACCTAC
AAGCAGGCGA CGACCGGCTT CCAGATCCGC GCCGGCGTGC CGCTGACCGA ATACATGTCG
CTGATCGGTC GCTACACCTT CAACCTCGAC GACGTGACGC TGTCGAAGAG CCAGTTCTAC
GCCGACCTCA ACGGCGACGG CGTGCAGACC TGCGAACCGC TCCTGGCCGG TCGATACCTG
TGCGATGCCA TCGGCAAGCG CACCAGCTCG ATCATTGGCG CCTCGGTGGT CTACGATACG
CTGGATAACC GCCTGCGCCC GAGCAGGGGC TCGCAGTTCG TGATCGGCGG CGACATTGCC
GGACTCGGCG GTTCGGTGAA GTACGCACGC CTCACCGCGA ACGCGGCCCG GTTCTTCCCG
CTCGGCAGCG GCTTCATCTT CTCGGTTCGC GGCGAGGGCG GGATCATCAA GGCGCTGGGC
AGCCGTTCGG ATGATCCAAG CATCGACGAC GTGCGCCTGA CCGACCGCTT CTTCCTTGGC
GAGCCGCAGA TCCGCGGCTT CGACATCCGC GGCGTCGGGC CGCGCGTGCT CCGCAAGTAT
CTCGTCGATA CCAACGGTGA CGGGACGGTG GACACGCCTT CGACCGACCG CAACCAGTGG
GTCGATGACG CGCTGGGCGG CAAGTACTAC TACCTGAGCC GTGCAGAACT GGAGATTCCG
CTGGGTTCCG GCGCGCGCGA ACTTGGCCTG CGTCCATCGA TCTACCTCGA CGCCGGTGCA
GTCTGGGGCG TCAATCGTCC GCAGACCCAG AACGTGAACT CGGCGGTTAC GCTCTACCGT
CAGACCTACC AGGGGACGAC GACGATCGTC ACCAGCCCAA CGGCACCCGA CAACACGGCC
AACACCGTCT ACACGGCCAT TCCGGCCTAT GTGGAGGAAT ACGTGGGTGA CACGCCATCG
CCGCGTGTTT CCGTCGGTAT CGGCGTCAAC TGGAACTCGC CATTCGGCCC GTTCCGTCTC
GACTTCGCCA AGGTCCTCAA GAAGGCCAAC GGCGACGACC CCAAGACTTT CACCTTCAAC
GTGGGAACCC AGTTCTGA
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| Protein sequence | MIGRNAVRNL QAPGLGAFLL ATTALAVVPS LAMAQAGGPP PRGAPPPGGM RGEPPVAPPE
ARAVEPGPAA PEGTPAEQII KSVTVQGSQR LEPDTILSYI RLRPGQAYSQ AAADQALKDL
YATELFADVS IRNNSGDVVV QVKENPVINR IILEGNKRLK EDKILPEIKL AARQIFTRSK
VRADVARIIE LYKRQGRFAA TVEPKMVMLD QNRVDIVFEI SEGPKSKVRQ INIIGNEKFS
DSELRGEMVT KQARFFRLFS SGTSYDPDRL AFDQQKLRQF YLTEGYADFR VVSAVAELTP
DKRDFIITYV VEEGERYKFG DVKVDSQIRD FDSEALAKRL PMKAGDWYNA KMVEDQVDAL
TETAGAFGYA FADVRPDFSR NKDDLTMSVN FRIAEAPRVY VERVDVNGNT LTQDKVVRRE
FRLAEGDAFN TFQIKRSTNR IKSLGYFQEK FEIEQKPGSA PDRIILEANV EERPTGELQL
SAGFSSLESF IFQGSIRQNN FRGRGQTIGL SVDYSRYTRS VQVSFTEPYL FDKNISLGVD
VYRRDLNSFN YFNSDRNTTY KQATTGFQIR AGVPLTEYMS LIGRYTFNLD DVTLSKSQFY
ADLNGDGVQT CEPLLAGRYL CDAIGKRTSS IIGASVVYDT LDNRLRPSRG SQFVIGGDIA
GLGGSVKYAR LTANAARFFP LGSGFIFSVR GEGGIIKALG SRSDDPSIDD VRLTDRFFLG
EPQIRGFDIR GVGPRVLRKY LVDTNGDGTV DTPSTDRNQW VDDALGGKYY YLSRAELEIP
LGSGARELGL RPSIYLDAGA VWGVNRPQTQ NVNSAVTLYR QTYQGTTTIV TSPTAPDNTA
NTVYTAIPAY VEEYVGDTPS PRVSVGIGVN WNSPFGPFRL DFAKVLKKAN GDDPKTFTFN
VGTQF
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