Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1355 |
Symbol | |
ID | 3917807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1400714 |
End bp | 1403167 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640444095 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_496633 |
Protein GI | 87199376 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.166416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGACC TGCCGATCCA TTCCGTCCTG CCGGACCTGC TTGCCGCGCT GCGCCAGCGG GAGAGCGCGG TGCTGATCGC GCCGCCCGGC GCGGGAAAGA CCACTGCGGT GGCGCCCGCC TTGCTGGCGG AACCCTGGTG CACCGGGCAG GTCATCGTGC TGTCGCCCCG CCGCGTTGCC GCGCGCGCAG CGGCCGAGCG TATGGCCGAG ATGCTCGGCG AAGAAGCGGG CGGCACCATC GGCTACGTTA CCCGGCTCGA CAGCAGGCGT TCGGCACGGA CACGGGTGCT GGTGGTGACC GAGGCGATCT TCGTCGCCAC GATTCTGGAT GATCCCGAAC TGTCCGGCGT TTCGGCGGTG CTCTTTGACG AAGCCCACGA ACGCCACCTC GATAGCGACC TTGGCCTCGC GCTCGCGGTG GAGGCTCAGG GTGTGCTTCG CGAGGACCTG CGGATCGTCG TGATGTCAGC CACGATCGAC GGCTCCCGCT TCGCCGCGCT GCTGGGCGAT GCGCCGGTGA TCGAGAGCGA GGGCAAGGCC CATCCGCTCG CGATCAGGTG GCTTGGCGCC CGGCCCGACG CGAAGGTCGA GGTGGCGATG GCCTCGGCGA TACAGACGGC ATGGCGCGAG GAGGAGGGCG ACATCCTCGC CTTCCTGCCC GGCGTTGCCC AGATCGAACG GACCGCAGAG ACTCTGGCCG AACGCCTTCC GCAGGCGCTG ATCCTGCCGC TGCACGGACA GGTTGAGCCC GGCGGCCAGC GCGCGGCAAT CCGGCGCGAT CCCTCCGGAC GTCGGCGCAT CGTGCTGGCC ACTGCGATTG CCGAAACGTC GCTGACGCTG GATGGCGTGT CCGTGGTGGT GGACGCCGGG CTGTCGCGCC GGGCAGAATT CGACAAGGCA GCGGGAGTCA CGCGCCTTGT CACCACGCGG GCGAGTCAGG CATCGGCTGC CCAGCGCGCG GGTCGCGCGG CGCGGCAGGG GCCGGGCGTT GCCTATCGAC TGTGGGAAGA GGCGTCCCAC GCGGGCCGTC CGGCGTTCGA CCCGCCTGAA ATGGTTACCA GCGACCTTGC GCCGCTGGCG CTCACACTGG CGCAGTGGGG CGCGGGCGAT CCGGCCACGA TGGCCTGGCT TGATCCGCCC CCGGCTGCTG CCATGGCGGC GGCCCAAGGT GCGCTGGCGG CGTTGGGTGC GCTCGACAAA GACAGGCGGA TCACCACGCA TGGCCGCGCG ATGGCGAAGC TGCCGATGGA GCCGGCGCTG GCCCATATGC TCCTTTTCGC CGCCGAGCGC GGGCAGGCAG AGGAGGCGGC GCGGCTTGCG CTGCTGTTGC AGGAACGTGG CCTTGGCGGA CGCGGCGAAG ACCTCGCGCG GCGGCTGGAC CGCTGGGCGA GCGAGCGCGG CAGCCGTGCC GAGGCTTCGC GCAAGCTGGC GGGGCGCTGG GCGCGCATGG CTGAGCGACT CGCCCCGCGC GGCAGGGCAG GCGAGGTGCC GACCGGCGTT CTTCTGGCCG AGGCATTCCC CGATCGTATC GCGCGCGCGC GTTCGGTTTC GGGCGAGGAA TGGCTGTCGT CTGGCGGGCG CGGGTATCGC CTCGACCCTG CCTCGCCTCT TGCGACCGCC CGCTGGCTGG TTATTGGCGA TGCCCAGGGT GAGGCGAAGG GCGCGCGGAT CACCGCAGCG GCGGCTCTCG AGGAAAGTGA TGTCACCCGC CACCTCGCGC ACCGGGTCGA GGAACGCCAT ACGCTGTCGT GGAACGCAGC GGACGGCCGT GTCGAAGCGC GGCTGGAGCG GCGGCTGGGC GCTATCGTGC TGGCACGCGT GCCCGATCCA GCGCCCGATG CAGAGGCCGC GGCGCGGCTC CTGATCGATG AAGTGCGCTC GCGCGGGCTG GATCTTCTGC CGCTGGGGGA GGGCGCCAAG GCGCTGCTCG TGCGGGCGGG CCATGCCGGC CTTGCGGCCT TGTCGGACGC CGCCTTGCTG GACGATCTGG AGGCGTGGCT ACTGCCGCTG GTGAAGGGCA GGCGGGATCT GGCAGTCGGG GCTGGCAGGC TGCACGATGC GCTGCTGGGG CGGCTGGACT GGAACGAACG GCAGATGCTC GACAAGCTGG CACCTGCCGA GTTCCGATCT CCCGCGGGGA CGAGCCATGC GATCGACTAT GGCCACGAGG GCGGACCTTG CGTGGAACTG CGCGTGCAGG CGCTGTTCGG GATCGACCGG CATCCTTGCG TGGGCCAGCC GCCGCGCCCG TTGTTGTTGA GCCTGACCAG CCCCGGCGGG AAGCCGATCC AGACGACGGC GGACCTCCCC GGCTTCTGGC GCGGGTCGTG GAAAGACGTC TGCAAGGACA TGAAGGGGCG CTATCCCAAG CACCGCTGGC CCGACGAACC GTGGAGCGAG GACCCCAGCC TGAAGACGAA GAACGCCTTC AATGCACAAA AGGGCCGGAC CTGA
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Protein sequence | MSDLPIHSVL PDLLAALRQR ESAVLIAPPG AGKTTAVAPA LLAEPWCTGQ VIVLSPRRVA ARAAAERMAE MLGEEAGGTI GYVTRLDSRR SARTRVLVVT EAIFVATILD DPELSGVSAV LFDEAHERHL DSDLGLALAV EAQGVLREDL RIVVMSATID GSRFAALLGD APVIESEGKA HPLAIRWLGA RPDAKVEVAM ASAIQTAWRE EEGDILAFLP GVAQIERTAE TLAERLPQAL ILPLHGQVEP GGQRAAIRRD PSGRRRIVLA TAIAETSLTL DGVSVVVDAG LSRRAEFDKA AGVTRLVTTR ASQASAAQRA GRAARQGPGV AYRLWEEASH AGRPAFDPPE MVTSDLAPLA LTLAQWGAGD PATMAWLDPP PAAAMAAAQG ALAALGALDK DRRITTHGRA MAKLPMEPAL AHMLLFAAER GQAEEAARLA LLLQERGLGG RGEDLARRLD RWASERGSRA EASRKLAGRW ARMAERLAPR GRAGEVPTGV LLAEAFPDRI ARARSVSGEE WLSSGGRGYR LDPASPLATA RWLVIGDAQG EAKGARITAA AALEESDVTR HLAHRVEERH TLSWNAADGR VEARLERRLG AIVLARVPDP APDAEAAARL LIDEVRSRGL DLLPLGEGAK ALLVRAGHAG LAALSDAALL DDLEAWLLPL VKGRRDLAVG AGRLHDALLG RLDWNERQML DKLAPAEFRS PAGTSHAIDY GHEGGPCVEL RVQALFGIDR HPCVGQPPRP LLLSLTSPGG KPIQTTADLP GFWRGSWKDV CKDMKGRYPK HRWPDEPWSE DPSLKTKNAF NAQKGRT
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