Gene Saro_1348 details

Gene Information

• Locus tag: Saro_1348
• ID: 3917799
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: -
• Start bp: 1392290
• End bp: 1394167
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640444087
• Product: ABC transporter related
• Protein accession: YP_496626
• Protein GI: 87199369
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAACGA TCAACGGCAT TACCGTGCGC CTTGGCGGGC GCGACATCAT TTCACGCGCT 
TCGGTGGCGG TGCCTCCGCG CGCCCGCGTC GGCCTCGTCG GTCGCAACGG CGCCGGCAAA 
TCCACGCTGG TCAAGGCGAT CATCGGCGAG ATCGAACCTG ACGAGGGCGC AGTCGAGATG 
CCCCGCCGTA CGCGGCTCGG CTACCTCGCG CAGGAAGCCC CGGCGGGTGA TTCGACGCCG 
TTCGAAACCG TGCTGTCGGC CGACAGGGAG CGGACCGAGC TTCTTGCGGA AGCCGAGACC 
TGCACCGATC CGGATCGCTT GGGCGACGTG CACGAGCGCC TGCTCGCCAT CGACGCATAC 
AGCGCCCCCG CCCGCGCCGC CCGTATCCTC ATCGGCCTTG GCTTCGACGA AGACATGCAG 
GCGCGCCCGC TCGACAGCTT TTCCGGCGGC TGGCGGATGC GCGTGGCGCT GGCGTCGCTG 
CTGTTCTCGG CGCCGGACGT TCTCCTGCTC GACGAACCGT CGAACCACCT CGACCTCGAA 
GCGACGCTCT GGCTCGAGAA CTTCCTCAAG GCCTACCCGG GCACGCTGCT GCTGATCAGC 
CACGAGCGCG ACCTGCTCAA CAACGTGACC GACCACATCG TCCATCTCCA TGCGGGCAAG 
CTAACGCTCT ATCCCGGCGG CTACGACAGC TTCGAGCGCC AGCGCAACGA ACGGCTCGCC 
CAGCAGGCCG CCGCCCGCGC CGCGCAGGAA GCGCAGGCCG ACCGGCTGAA GGACTACATT 
GCCCGCAACA GCGCCCGCGC CTCGACCGCC AAGCAGGCCC AGTCGCGCGC CAAGATGCTG 
GCGAAGATGC AGCCGATCGC GGCGGTCGTG GAAGATCCGT CGCTCAGCTT CGACTTCCCC 
GATCCCGAGG AACTGCGCCC ACCGCTCATC ACCCTCGACC TCGCCTCGGT CGGCTATGCG 
CCGGGCAAGC CGGTACTGCA GCGGCTCAAC CTGCGCATCG ATCCGGACGA CCGCATTGCG 
CTGCTCGGCC GCAACGGCAA CGGCAAGACC ACGCTGGCCC GCCTGCTCGC CGCCCAGCTC 
GCACCGATGG ACGGGGCGAT GACGGCAACG TCGAAGATGC AGGTCGGCTA CTTCACCCAG 
TACCAGGTGG AGGAAATCGC GGGCGGAGCG ACGCCGCTCG AACTGATGAC GCGCGCGATG 
GAGGGCAAGA CTCCCGCCGC CATCCGCGCA CAGCTCGGCC GCTTCGGCTT CTCTGGCAAT 
CGCGCGACAG CCGAAGTCGG CACGCTTTCG GGCGGGGAGC GCGCGCGGCT TGCACTGGCG 
CTGGTCACGC GCGACGCACC GCACCTGCTC GTGCTCGACG AACCGACCAA CCACCTCGAC 
ATCGACGCGC GCGAAGCGCT GGTCCAGGCG CTCAACGCCT ACAAGGGCGC GGTCATCCTC 
ATCAGCCACG ACCGCCACAT GGCCGAACTG GTGGCAGACC GGCTCGTGCT GGTCGATGGC 
GGCACGGCCC GCCCCTACGA CGGCAGCATC GAGGACTACA TCGACTTCAT CCTGGGCCGG 
AACCAGCCCA AGGCGGACGG TGCGGGCGAG GCCAGGGAAA AGGGCGCGGC GCAGGATCGC 
AAGGCCCGCG CCCTCGCCCG CGAGGAATTG CGTGCGCTCA GGAAGAAGCA GACCGAAGCC 
GAAACCCGCG TCGGCAAGCT CCAGTCGGAA ATCGCGCAGA TCGACCGCGC GATGTTCGAA 
CCTTCCAGCG CCCCGCCCGC GCTCGCCAAG CTGACGATGG GCGACCTTGC CCACCGTCGC 
GGCAAGCTGG CGAAGGAGTT GGAAGAGGCC GAAATGCTGT GGCTGGAAGC CGGCGAGGCG 
CTCGAAGCGG CGGGCTGA 

 

Protein sequence

MLTINGITVR LGGRDIISRA SVAVPPRARV GLVGRNGAGK STLVKAIIGE IEPDEGAVEM 
PRRTRLGYLA QEAPAGDSTP FETVLSADRE RTELLAEAET CTDPDRLGDV HERLLAIDAY 
SAPARAARIL IGLGFDEDMQ ARPLDSFSGG WRMRVALASL LFSAPDVLLL DEPSNHLDLE 
ATLWLENFLK AYPGTLLLIS HERDLLNNVT DHIVHLHAGK LTLYPGGYDS FERQRNERLA 
QQAAARAAQE AQADRLKDYI ARNSARASTA KQAQSRAKML AKMQPIAAVV EDPSLSFDFP 
DPEELRPPLI TLDLASVGYA PGKPVLQRLN LRIDPDDRIA LLGRNGNGKT TLARLLAAQL 
APMDGAMTAT SKMQVGYFTQ YQVEEIAGGA TPLELMTRAM EGKTPAAIRA QLGRFGFSGN 
RATAEVGTLS GGERARLALA LVTRDAPHLL VLDEPTNHLD IDAREALVQA LNAYKGAVIL 
ISHDRHMAEL VADRLVLVDG GTARPYDGSI EDYIDFILGR NQPKADGAGE AREKGAAQDR 
KARALAREEL RALRKKQTEA ETRVGKLQSE IAQIDRAMFE PSSAPPALAK LTMGDLAHRR 
GKLAKELEEA EMLWLEAGEA LEAAG