Gene Saro_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1335 
Symbol 
ID3917785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1376224 
End bp1376817 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content63% 
IMG OID640444073 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_496613 
Protein GI87199356 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0446857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACGC TGCCGAACCT TCTCACCCTG TCGCGGATCG TGACCGTTCC CTTGTTGGCA 
GCACTGCTGT GGTGGCCCGA ATGGCGACTG GGCTATGGCA TGGCCTTCGC GGTCTACTGC 
CTGATGGGGG TTACCGATTA CTTCGACGGC TACCTTGCCC GCGCCAAGGG AGCGGTGAGC 
AAGCTGGGCA TCTTTCTTGA CCCGATTGCC GACAAGATCA TGGTCGCGGC GGTGATTCTG 
GTGCTGACCG CGCAGGGTGT CCTGCGCGGG CCCTACGTTG GGGACATGCA CGTGATCGCG 
GGGCTGGTGA TCCTGCTGCG CGAAATCGCG GTGTCGGGAC TGCGCGAGTT TCTCGGCGGC 
ATCCAGGTCT CTGTCCCGGT AAGCCGGCTC GCCAAGTGGA AGACGACGTT CCAGATGGTG 
TGCCTTGGTG CGCTGATCCT CGGGCAGGCG CTGCCGGAAT GGCTCATGAC AATCGGCGGC 
TTCACGGTGA ACGTGCCGCA TACGGTTGGC CTTTCGACGC TGTGGGGCGC GGCGGTGCTG 
ACCGTGATTA CCGGATGGGA TTACCTGAGG GTCGGCCTGA AGCACATGGA TTGA
 
Protein sequence
MLTLPNLLTL SRIVTVPLLA ALLWWPEWRL GYGMAFAVYC LMGVTDYFDG YLARAKGAVS 
KLGIFLDPIA DKIMVAAVIL VLTAQGVLRG PYVGDMHVIA GLVILLREIA VSGLREFLGG 
IQVSVPVSRL AKWKTTFQMV CLGALILGQA LPEWLMTIGG FTVNVPHTVG LSTLWGAAVL 
TVITGWDYLR VGLKHMD