Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1310 |
Symbol | |
ID | 3917942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1353867 |
End bp | 1355732 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640444047 |
Product | acyltransferase 3 |
Protein accession | YP_496588 |
Protein GI | 87199331 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.502976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCAACATC GTCGCGAAAT CGAAGGACTG CGCGCCGTTG CCGTGATCCC GGTGGTTCTC TTCCACGCGG GCGTGGGCGG GCTCTCGGGC GGCTTCGCCG GGGTCGATGT GTTCTTCGTG ATCAGCGGCT ACCTGATCGC TTCGACGATC CTCGACCAGA CGGCGCAAGG CCGCTTCTCG CTTCGCCAGT TCTACGAAAG ACGCGCCCGG CGCATCCTTC CCGCGCTCCT GCCGGTCCTC GCGGCAAGCG CGGTTCTGGC GTGGCTGCTG CTCGTCCCCG AGGACTTCCG CAAGTTCGCG CAGGCCCTGG GCGCCACCGC CACCTTCGGC GCCAATTTCC TGTTCGCCCG GCGCACCGGC TATTTCGACG ACGACGAAGG CTTCCGTCCA CTGCTGCACA TGTGGAGCCT GTCGGTGGAG GAACAGTTCT ACCTGCTGTT CCCCCTGCTC ATGCTGGCAT TGCGGCACAT CGGGCGCGCT CGCCTGGCCT TGGCCCTCGC AGGGCTGGGC TTGCTGTCGT TCACGCTGAT GCAGGCGCTG CGCCCGATCG ACCCTGCGCT GTCCTTCTAC ATGCTGCCCA CCCGCGCGTG GGAGCTTCTG GCGGGCGCGA CCTGCGCCGC CCTGCCCTTG CCCGCCCGGC AGGATGGACG CCTTGCCACC GCCGGACTTG CGCTCGTCGC CGCAGGGTTC GTCGCCGCAA GCCCCGCCTC AGCGCCGGAC TGGACGCTGC TCCTTCCGGT TATCGGCACC GCGCTCATCC TGCTGCACGC GGGGCCGGCG AACCTCGCCG GCCGGGCGCT CGCATGGCGC CCGCTCACCG CCATCGGCGC GGCGTCCTAT GGCATATACC TTTGGCACGC CCCGCTGCTC GCGTTCCTGC GCTACGCATG GCTGGGCGAG CCGCCGCCGC TACTTCTTTC GGGAGCCATC GCGCTGGCCT TTGCACTTGG CTTCGCGTCA CTGCGCCTGA TCGAGATGCC CGTCCGCCAG AGCTTGGCCC TGCGCCGTCC CTCGCACCTG GCCATGGTCT GCGCGGGCGG CCTGGCCCTT GCCCTCGCGG CAGGCGCGGC AGGCCATTTC GGCCGCCTCG AACCCCGAAG CGCGACCCTG CGCAACAAGC TGGGCGGCGC GCCGTCCGCC CTCCCCTATC CCGCCAGCAG CATTCCGTCG CCCGGCAGGC CGGTTCCTTA CATCCTCTAT GGCGACAGCC ACGCGCGCCA GTATTCCAGC GCCCTGCGCG AAGCTTTCGG CGAAGGCGCG ATGCTCACCG CCTCGGGCTG CCTCGCCCTT CCCGGCATGA GCAACATGGC CGTCGCCGCC GAGGAGGCGA AGGAATGCGA AGCCCTGCCG GCCGAACTCG CCCGCCTTGT CGCCCGGCGC GGAATAGGCA CTGTGGTTTG GGCACAACGC TGGGACCGAA ACCTGTTCTC GTCGGGCTCA CACCTCCCCC TCGGTCGCAC TTCCGCCGAG GGGCGCGCGG CTTTCCTCGC CGGGCTGGAT CGGCTGCGCG GCGCATTGCC GCCCGGCACC CGCATGGTCC TTGTCGGCAA CGTCCCCACC GCCGCACCCG CAGGTCCGGG CATGGCGGGC GGCTACCTGC GCTGCCGCGC ATACGTCAAC GCGACGTGCC CCACCTCGTA TCCGCGCGCG CTTGCCGAAG GCCATGCGAT CAACCCGGTG CTGGCCGCCT ATGCCGAGCG TCATGCGGAC GTCACCTTCT TCGACCCGGC CAGCGCCCTG TGCCACGGCG GTGCGTGCGA TATTCTTGTC GGCGGCGACC TCCTCTATTC CGACCACACC CATCTTACGG TGGGCGGCTC GCGCCGCGTG GTCGGCCGCA TGAAGCAGGT GCTTCCGGCG CTCTGA
|
Protein sequence | MQHRREIEGL RAVAVIPVVL FHAGVGGLSG GFAGVDVFFV ISGYLIASTI LDQTAQGRFS LRQFYERRAR RILPALLPVL AASAVLAWLL LVPEDFRKFA QALGATATFG ANFLFARRTG YFDDDEGFRP LLHMWSLSVE EQFYLLFPLL MLALRHIGRA RLALALAGLG LLSFTLMQAL RPIDPALSFY MLPTRAWELL AGATCAALPL PARQDGRLAT AGLALVAAGF VAASPASAPD WTLLLPVIGT ALILLHAGPA NLAGRALAWR PLTAIGAASY GIYLWHAPLL AFLRYAWLGE PPPLLLSGAI ALAFALGFAS LRLIEMPVRQ SLALRRPSHL AMVCAGGLAL ALAAGAAGHF GRLEPRSATL RNKLGGAPSA LPYPASSIPS PGRPVPYILY GDSHARQYSS ALREAFGEGA MLTASGCLAL PGMSNMAVAA EEAKECEALP AELARLVARR GIGTVVWAQR WDRNLFSSGS HLPLGRTSAE GRAAFLAGLD RLRGALPPGT RMVLVGNVPT AAPAGPGMAG GYLRCRAYVN ATCPTSYPRA LAEGHAINPV LAAYAERHAD VTFFDPASAL CHGGACDILV GGDLLYSDHT HLTVGGSRRV VGRMKQVLPA L
|
| |