Gene Saro_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1310 
Symbol 
ID3917942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1353867 
End bp1355732 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content70% 
IMG OID640444047 
Productacyltransferase 3 
Protein accessionYP_496588 
Protein GI87199331 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.502976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAACATC GTCGCGAAAT CGAAGGACTG CGCGCCGTTG CCGTGATCCC GGTGGTTCTC 
TTCCACGCGG GCGTGGGCGG GCTCTCGGGC GGCTTCGCCG GGGTCGATGT GTTCTTCGTG
ATCAGCGGCT ACCTGATCGC TTCGACGATC CTCGACCAGA CGGCGCAAGG CCGCTTCTCG
CTTCGCCAGT TCTACGAAAG ACGCGCCCGG CGCATCCTTC CCGCGCTCCT GCCGGTCCTC
GCGGCAAGCG CGGTTCTGGC GTGGCTGCTG CTCGTCCCCG AGGACTTCCG CAAGTTCGCG
CAGGCCCTGG GCGCCACCGC CACCTTCGGC GCCAATTTCC TGTTCGCCCG GCGCACCGGC
TATTTCGACG ACGACGAAGG CTTCCGTCCA CTGCTGCACA TGTGGAGCCT GTCGGTGGAG
GAACAGTTCT ACCTGCTGTT CCCCCTGCTC ATGCTGGCAT TGCGGCACAT CGGGCGCGCT
CGCCTGGCCT TGGCCCTCGC AGGGCTGGGC TTGCTGTCGT TCACGCTGAT GCAGGCGCTG
CGCCCGATCG ACCCTGCGCT GTCCTTCTAC ATGCTGCCCA CCCGCGCGTG GGAGCTTCTG
GCGGGCGCGA CCTGCGCCGC CCTGCCCTTG CCCGCCCGGC AGGATGGACG CCTTGCCACC
GCCGGACTTG CGCTCGTCGC CGCAGGGTTC GTCGCCGCAA GCCCCGCCTC AGCGCCGGAC
TGGACGCTGC TCCTTCCGGT TATCGGCACC GCGCTCATCC TGCTGCACGC GGGGCCGGCG
AACCTCGCCG GCCGGGCGCT CGCATGGCGC CCGCTCACCG CCATCGGCGC GGCGTCCTAT
GGCATATACC TTTGGCACGC CCCGCTGCTC GCGTTCCTGC GCTACGCATG GCTGGGCGAG
CCGCCGCCGC TACTTCTTTC GGGAGCCATC GCGCTGGCCT TTGCACTTGG CTTCGCGTCA
CTGCGCCTGA TCGAGATGCC CGTCCGCCAG AGCTTGGCCC TGCGCCGTCC CTCGCACCTG
GCCATGGTCT GCGCGGGCGG CCTGGCCCTT GCCCTCGCGG CAGGCGCGGC AGGCCATTTC
GGCCGCCTCG AACCCCGAAG CGCGACCCTG CGCAACAAGC TGGGCGGCGC GCCGTCCGCC
CTCCCCTATC CCGCCAGCAG CATTCCGTCG CCCGGCAGGC CGGTTCCTTA CATCCTCTAT
GGCGACAGCC ACGCGCGCCA GTATTCCAGC GCCCTGCGCG AAGCTTTCGG CGAAGGCGCG
ATGCTCACCG CCTCGGGCTG CCTCGCCCTT CCCGGCATGA GCAACATGGC CGTCGCCGCC
GAGGAGGCGA AGGAATGCGA AGCCCTGCCG GCCGAACTCG CCCGCCTTGT CGCCCGGCGC
GGAATAGGCA CTGTGGTTTG GGCACAACGC TGGGACCGAA ACCTGTTCTC GTCGGGCTCA
CACCTCCCCC TCGGTCGCAC TTCCGCCGAG GGGCGCGCGG CTTTCCTCGC CGGGCTGGAT
CGGCTGCGCG GCGCATTGCC GCCCGGCACC CGCATGGTCC TTGTCGGCAA CGTCCCCACC
GCCGCACCCG CAGGTCCGGG CATGGCGGGC GGCTACCTGC GCTGCCGCGC ATACGTCAAC
GCGACGTGCC CCACCTCGTA TCCGCGCGCG CTTGCCGAAG GCCATGCGAT CAACCCGGTG
CTGGCCGCCT ATGCCGAGCG TCATGCGGAC GTCACCTTCT TCGACCCGGC CAGCGCCCTG
TGCCACGGCG GTGCGTGCGA TATTCTTGTC GGCGGCGACC TCCTCTATTC CGACCACACC
CATCTTACGG TGGGCGGCTC GCGCCGCGTG GTCGGCCGCA TGAAGCAGGT GCTTCCGGCG
CTCTGA
 
Protein sequence
MQHRREIEGL RAVAVIPVVL FHAGVGGLSG GFAGVDVFFV ISGYLIASTI LDQTAQGRFS 
LRQFYERRAR RILPALLPVL AASAVLAWLL LVPEDFRKFA QALGATATFG ANFLFARRTG
YFDDDEGFRP LLHMWSLSVE EQFYLLFPLL MLALRHIGRA RLALALAGLG LLSFTLMQAL
RPIDPALSFY MLPTRAWELL AGATCAALPL PARQDGRLAT AGLALVAAGF VAASPASAPD
WTLLLPVIGT ALILLHAGPA NLAGRALAWR PLTAIGAASY GIYLWHAPLL AFLRYAWLGE
PPPLLLSGAI ALAFALGFAS LRLIEMPVRQ SLALRRPSHL AMVCAGGLAL ALAAGAAGHF
GRLEPRSATL RNKLGGAPSA LPYPASSIPS PGRPVPYILY GDSHARQYSS ALREAFGEGA
MLTASGCLAL PGMSNMAVAA EEAKECEALP AELARLVARR GIGTVVWAQR WDRNLFSSGS
HLPLGRTSAE GRAAFLAGLD RLRGALPPGT RMVLVGNVPT AAPAGPGMAG GYLRCRAYVN
ATCPTSYPRA LAEGHAINPV LAAYAERHAD VTFFDPASAL CHGGACDILV GGDLLYSDHT
HLTVGGSRRV VGRMKQVLPA L