| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1302 |
|---|
| Symbol | |
|---|
| ID | 3917934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 1347061 |
|---|
| End bp | 1348275 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640444039 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_496580 |
|---|
| Protein GI | 87199323 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.212962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC AGACTCCCAA CAGCTTCCGC AACCTGCCCG ACGAGCGCGG CCACTTCGGC
CAGTTCGGCG GTCGCTACGT CGCCGAAACG CTGATGCCGC TGATCCTCGA TCTCGAACGC
GAGTACAACG CCGCGAAAGC CGACCCGGCG TTCAAGGCCG AGTTCGACGA CCTCCTGGAA
CACTATGTCG GCCGCCCGAG CCCGCTCTAC TTCGCGCCGC GGCTGACCGA GGAGCTGGGC
GGAGCACAGG TCTGGTTCAA GCGCGACGAG CTGAACCACA CCGGCGCGCA CAAGATCAAC
AACTGCATCG GCCAGATCCT GCTCGCCATG CGCATGGGCA AGACCAGGAT CATCGCCGAG
ACCGGCGCGG GCCAGCACGG CGTGGCCACC GCCACCGTCT GCGCGCGCTT CGGCCTGCCC
TGCGTGATCT TCATGGGTGC GACCGACGTT GCCCGCCAGG CGCCCAACGT GTTCCGCATG
AAGCTGCTCG GCGCCGAAGT CGTGCCGGTC ACGGCGGGCG CGGGCACGCT GAAGGACGCG
ATGAACGAGG CGCTGCGCGA CTGGGTCGCC AACGTCCACA ACACTTTCTA CATCATCGGC
ACCGCCGCGG GCCCGCACCC CTATCCGGAA CTGGTCCGCG ACTTCCAGAG CGTGATCGGC
AAGGAAGCGC GCGCGCAGAT GCTCTCCCGC ACCGGCCGCC TGCCCGACCT TCTGGTCGCG
GCGATCGGCG GCGGCTCCAA CGCCATCGGC CTGTTCCACC CCTTCCTCGA CGACCCGAGC
GTCAGGATGC TGGGCGTGGA GGCCGCCGGC CACGGCCTCG ACAAGGAGCA CGCCGCCAGC
CTCGCGGGCG GACGCCCCGG CATCCTCCAC GGCAACAAGA CCTACCTGCT GCAGGACGAG
GACGGCCAGA TCACCGAAGG TCACTCGATC TCGGCTGGCC TCGACTATCC CGGCATCGGC
CCGGAACACG CCTGGCTGAA GGAAATCGGC CGCGTCGACT ACACCTCGGT CACCGATACC
GAGGCGCTCG ACGCCTTCCA GCTCCTGTGC CGCACCGAAG GCATCATCCC CGCGCTCGAA
CCGGCCCATG CCATCGCGGC GGTCAAGAAG GTCGCCCCGA CCATGGGCAA GGACGAAATC
ATCCTCGCCA ACCTATGCGG CCGTGGCGAC AAGGACATCT TCTCGGTGGC CGAACATCTG
GGGGTGTCGC TCTGA
|
|---|
| Protein sequence | MTAQTPNSFR NLPDERGHFG QFGGRYVAET LMPLILDLER EYNAAKADPA FKAEFDDLLE
HYVGRPSPLY FAPRLTEELG GAQVWFKRDE LNHTGAHKIN NCIGQILLAM RMGKTRIIAE
TGAGQHGVAT ATVCARFGLP CVIFMGATDV ARQAPNVFRM KLLGAEVVPV TAGAGTLKDA
MNEALRDWVA NVHNTFYIIG TAAGPHPYPE LVRDFQSVIG KEARAQMLSR TGRLPDLLVA
AIGGGSNAIG LFHPFLDDPS VRMLGVEAAG HGLDKEHAAS LAGGRPGILH GNKTYLLQDE
DGQITEGHSI SAGLDYPGIG PEHAWLKEIG RVDYTSVTDT EALDAFQLLC RTEGIIPALE
PAHAIAAVKK VAPTMGKDEI ILANLCGRGD KDIFSVAEHL GVSL
|
|---|
| |