| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1279 |
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| Symbol | alaS |
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| ID | 3917910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1319280 |
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| End bp | 1321925 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640444015 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_496557 |
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| Protein GI | 87199300 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.302491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCGA CGAACGAAAT CCGCCGGTCC TTCCTCGAAT ACTTCGGCTC GAACGGGCAC
GATGTGGTGC CGTCCGCGCC GCTGGTGCCG TACAACGACC CGACGCTGAT GTTCACCAAC
GCGGGGATGG TGCCGTTCAA GAACGTGTTC ACCGGGCTGG AGACGCGCGC CGTGCCGCGC
GCCACCTCCT CGCAGAAATG CGTACGCGCC GGCGGCAAGC ACAACGATCT CGACAACGTG
GGCTACACTG CGCGCCACCA CACCTTCTTC GAGATGCTCG GCAATTTCTC GTTTGGCGAT
TACTTCAAGG AACAGGCGAT CACCCACGCC TGGACCCTGC TCACGCGCGA ATGGGGCCTT
CCGAAGGACA AGCTCCTCGC CACCGTCTAT CACACCGACG ACGAAGCGTT CGAGCTGTGG
AAGAAGATCG CCGGTCTCCC TGAAGACCGC ATCATCCGCA TCGCCACCAA GGACAACTTC
TGGGCAATGG GCGATGACGG TCCGTGCGGT CCTTGCTCGG AAATCTTCTT CGACCACGGC
GATCACATCT GGGGCGGGCC TCCGGGGTCG CCGGACGAGG ACGGCGATCG CTTCATCGAG
ATCTGGAACC TCGTGTTCAT GCAGTTCGAG CAGACCGCCG GCGAGATCAC CGGCAGCCTG
CCCAAGCCCA GTATCGACAC CGGCATGGGT CTCGAACGCA TCGCGGCCGT GCTTCAGGGC
GAGCATGACA ACTACGATAC CGATACGTTC AAGGCCCTGA TCGCCGCGTC GGAAAGCCTG
ACCTCGGTCC GGGCCGAGGG CGATCACAAG GCCAGCCACC GCGTGATCGC GGATCACCTG
CGCTCGACCA GCTTCCTTCT TGCCGATGGC GTGCTGCCGT CCAACGAAGG TCGTGGCTAT
GTCCTGCGCC GCATCATGCG TCGTGCCATG CGCCATGCGC ACCTGCTGGG CGCGAAGGAC
CCGCTGATGC ACCGCCTCGT GCCCGCGCTT GTCGCGGAAA TGGGCGCTGC CTATCCGGAA
CTCGGACGCG CCCAGCCGCT GATCGAGGAA ACGCTGCTGC GCGAGGAAGT GCAGTTCCGC
CGCACGCTGT CGAACGGCAT CAAGCTGCTC GACGAAGCGA CCGCGACGTT GGGCGAGGGC
GACAAGCTGC CCGGCGACAC CGCGTTCAAG CTCTACGACA CTTACGGTTT CCCCTACGAC
CTCACCGAGG ATGCCTTGCG CGCTCGCGGC ATAGCGGTGG ACCGCGAAGG CTTCGACGCG
GCGATGGCCC AGCAGAAGGC GGCAGCGCGC GCTGCGTGGA AGGGCTCGGG CCAGGCGGCG
GACAGCGAAG TCTGGTTCGA CATTGCCGAA CGCGTCGGCG CCACCGAATT CACCGGCTAC
ACCGCCACCA CCGGCGAGGC GCAGGTCGTC GCGCTGGTCA AGGACGGCAA GGAAGTCGAC
AGCGCGATGG CGGGCGATGA TGTTGCCGTC ATCGTCAACC AGACCCCGTT CTACGGCGAG
TCCGGCGGCC AGACGGGCGA CGCGGGAACT ATCACCGGCG GCGACGGGCT GGTCCTCGCG
GTCAGCGATA CCGCCAAGCC GCTGGGCCGG CTCCACGCGC ACAACGCAAA GGTGCAAAGC
GGCTCGGTCA AGGTCGGCGA CGTGGTCAGG CTCGACATCG ATGTCGCGCG CCGCGATGCG
ATCCGCGCCA ATCACTCGGC GACGCACCTG CTTCACGCGG CGCTGCGCCA CCGCCTCGGT
GCGCACGTCA CGCAGAAGGG GTCGCTCGTC GCGGCGGATC GCCTGCGCTT CGACTTCTCG
CACCCGACCG CGCTTTCCGC CGAGGACATC GCCGCGATCG AGGCCGAAGT GAACGCCGAG
ATCCGCGCCA ACGAAGTCGT CACCACCCGC CTGATGAGCC CGGAAGACGC GATCGAAGCG
GGCGCGATGG CGCTGTTCGG CGAAAAGTAC GGCGATGAAG TGCGCGTGCT CAGCATGGGG
CGCGTCGCGG ACAAGCACTA TTCGGTCGAA CTGTGCGGCG GCACCCATGT GCGCGCGCTG
GGCGATATCG GCGTGTTCCG CATCGTCAGC GAAAGCGCGG TCTCCTCGGG CGTGCGCCGC
ATCGAGGCGC TGACCGGCGA AGGTGCGCGC CAGTGGTTCG TCGCGCGCGA GGATGCGCTC
AAGAACACCG CATCGATCCT TCGCACGACG CCGGAAGACG TCGAGGCGCG CGTCACGGCG
CTGATGGACG AGCGCAAGAA GCTCGAACGC GAACTGGCCG AGGCGAAGAA GGCTCTGGCG
CTCGGCGGTG GATCGGCAAA GGCCGAGAAC GCCGACGAGG ACGTGAACGG CGTGAAGTTC
TCGGGCCAGG TGCTTGAAGG GTTGGACCCC AAGGATCTGC GCGGCCTGCT CGATCAGGCC
AAGCAGCGTC TCGGCTCGGG CGTGGCCGTG ATCGTCGCGG TCAACGAGGG CAAGGCGAGC
ATCGCTGCCG CCGTGACCGA CGACCTTGCG GGCAAGGTCA GCGCGGTCGA TCTGGTGCGC
GCTGGCGTCG AGGCGCTGGG TGGCAAGGGC GGCGGTGGCC GTCCGGACAT GGCGCAGGGC
GGCGGGCCAG AAGGCTCCAG GGCAGCGGAT GCTATTGCAG CGGCAAGGGC GGTTCTGACC
GCCTGA
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| Protein sequence | MTSTNEIRRS FLEYFGSNGH DVVPSAPLVP YNDPTLMFTN AGMVPFKNVF TGLETRAVPR
ATSSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKEQAITHA WTLLTREWGL
PKDKLLATVY HTDDEAFELW KKIAGLPEDR IIRIATKDNF WAMGDDGPCG PCSEIFFDHG
DHIWGGPPGS PDEDGDRFIE IWNLVFMQFE QTAGEITGSL PKPSIDTGMG LERIAAVLQG
EHDNYDTDTF KALIAASESL TSVRAEGDHK ASHRVIADHL RSTSFLLADG VLPSNEGRGY
VLRRIMRRAM RHAHLLGAKD PLMHRLVPAL VAEMGAAYPE LGRAQPLIEE TLLREEVQFR
RTLSNGIKLL DEATATLGEG DKLPGDTAFK LYDTYGFPYD LTEDALRARG IAVDREGFDA
AMAQQKAAAR AAWKGSGQAA DSEVWFDIAE RVGATEFTGY TATTGEAQVV ALVKDGKEVD
SAMAGDDVAV IVNQTPFYGE SGGQTGDAGT ITGGDGLVLA VSDTAKPLGR LHAHNAKVQS
GSVKVGDVVR LDIDVARRDA IRANHSATHL LHAALRHRLG AHVTQKGSLV AADRLRFDFS
HPTALSAEDI AAIEAEVNAE IRANEVVTTR LMSPEDAIEA GAMALFGEKY GDEVRVLSMG
RVADKHYSVE LCGGTHVRAL GDIGVFRIVS ESAVSSGVRR IEALTGEGAR QWFVAREDAL
KNTASILRTT PEDVEARVTA LMDERKKLER ELAEAKKALA LGGGSAKAEN ADEDVNGVKF
SGQVLEGLDP KDLRGLLDQA KQRLGSGVAV IVAVNEGKAS IAAAVTDDLA GKVSAVDLVR
AGVEALGGKG GGGRPDMAQG GGPEGSRAAD AIAAARAVLT A
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