| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1267 |
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| Symbol | rpmD |
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| ID | 3917898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1307276 |
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| End bp | 1307452 |
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| Gene Length | 177 bp |
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| Protein Length | 58 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640444003 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_496545 |
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| Protein GI | 87199288 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0399706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACCA TCAAGATCAA GCAGATCGGT TCGCCGATCC GTCGCCCCGA GAGCCAGAAG
AAGGTTCTCA TCGGCCTCGG CCTGGGCAAG ATGCACCGCG TCGTCGAGGT GGAAGACACC
CCGGAAGTGC GCGGCGCCAT CGCCAAGCTT CCCCACATGG TGGCCGTGGT CGACTGA
|
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| Protein sequence | MATIKIKQIG SPIRRPESQK KVLIGLGLGK MHRVVEVEDT PEVRGAIAKL PHMVAVVD
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