Gene Saro_1264 details

Gene Information

• Locus tag: Saro_1264
• Symbol: rplF
• ID: 3917895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1305670
• End bp: 1306203
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640444000
• Product: 50S ribosomal protein L6
• Protein accession: YP_496542
• Protein GI: 87199285
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.0989629
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCGCA TCGGCAAGAG GCCGGTGACG ATCCCGAGTG GCGTCACCGC GAACATCGCG 
GACGGTGTGC TGACCGTGAA GGGCCCCAAG GGCACGCTCA CGCTCACGCT CCGTGACGAG 
ATCAGCTACA CCGTCGATGG CGACACGATC CTCGTGAAGC CCGCCAACGA CACCAAGGGC 
GCTCGCGCGT TCTGGGGCAT GCAGCGCACG CTCGTCGACA ACCTGGTGAC CGGCGTCACG 
CAGGGCTACA CCAAGGTCCT CGAGATCACT GGTGTCGGCT ACCGCGCCAA CGCCCAGGGC 
AAGAACCTGA AACTGCAGCT CGGCTACAGC CACGACGTCG ATTTCCCGGT GCCTGAAGGC 
ATCGAGATCA AGACCCCGGA CAACACCACG GTGGAAATCT CGGGCATCGA CAAGCAGAAG 
GTCGGCCAGG TCGCCGCAGA GATCCGTCGC TGGCGCAAGC CCGAGCCTTA CAAGGGCAAG 
GGCATCAAGT ACCGCGGCGA GTTTATCTTC CGCAAGGAAG GGAAGAAGAA GTAA 

 

Protein sequence

MSRIGKRPVT IPSGVTANIA DGVLTVKGPK GTLTLTLRDE ISYTVDGDTI LVKPANDTKG 
ARAFWGMQRT LVDNLVTGVT QGYTKVLEIT GVGYRANAQG KNLKLQLGYS HDVDFPVPEG 
IEIKTPDNTT VEISGIDKQK VGQVAAEIRR WRKPEPYKGK GIKYRGEFIF RKEGKKK