Gene Saro_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1252 
SymbolrplB 
ID3917883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1300406 
End bp1301242 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID640443988 
Product50S ribosomal protein L2 
Protein accessionYP_496530 
Protein GI87199273 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.275281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTCA AGAGCTATAA CCCGACCAGC CCCGCCCGTC GCGGCCTGGT CCTCGTCGAC 
AAGTCGGCGC TGTGGAAGGG CAAGCCTGTC AAGGCTCTGA CCGAAGGCAA GCGCAAGACC
GGCGGCCGCA ACAACAAGGG TCATGTCACT TCGCGTGGCA TTGCCGGTGG TCACAAGCAG
AAGTACCGCT ACGTCGACTT CAAGCGTCGC AAGTGGGACA TGCCGGCTAC CGTCGAGCGT
CTGGAATATG ACCCCAACCG CACCGCGTTC ATCGCGCTGG TCAAGTACGA GGACGGCGAA
CTCGCCTACA TCCTCGCGCC GCAGCGCCTT GGCGTTGGCG ATCAGGTCAT CGCCGGCGAG
AAGACCGACG TGAAGCCTGG CAACGCCATG CTCCTGTCGC AGATGCCGGT CGGCACCATC
ATCCACAACG TGGAGATGAA GCCGGGCAAG GGCGGTCAGA TCGCCCGTTC CGCAGGCACT
TATGTCCAGC TCGTCGGTCG TGACCGCGGC ATGGTCATCG TTCGCCTGAA CTCGGGCGAG
CAGCGCTACC TGCGCGGTGA CTGCATGGGC ACCGTCGGCG CCGTGTCGAA CCCCGACAAT
GGCAACCAGA ACCTCGCCAA GGCCGGCCGC AACCGCTGGC TGGGCAAGCG TCCGCTTACC
CGCGGCGTTG CGAAGAACCC GGTCGACCAC CCGCACGGTG GTGGTGAAGG CCGTACTTCG
GGTGGCCGTC ATCCTGTGAC TCCGTGGGGC AAGCCGACCA AGGGCGCCCG CACCCGTCAC
AACAAGGCGA CGGACAAGAT GATCATCCGT TCGCGCCACG CGAAGAAGAA GAGGTAA
 
Protein sequence
MALKSYNPTS PARRGLVLVD KSALWKGKPV KALTEGKRKT GGRNNKGHVT SRGIAGGHKQ 
KYRYVDFKRR KWDMPATVER LEYDPNRTAF IALVKYEDGE LAYILAPQRL GVGDQVIAGE
KTDVKPGNAM LLSQMPVGTI IHNVEMKPGK GGQIARSAGT YVQLVGRDRG MVIVRLNSGE
QRYLRGDCMG TVGAVSNPDN GNQNLAKAGR NRWLGKRPLT RGVAKNPVDH PHGGGEGRTS
GGRHPVTPWG KPTKGARTRH NKATDKMIIR SRHAKKKR