Gene Saro_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1250 
SymbolrplD 
ID3917881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1299478 
End bp1300101 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID640443986 
Product50S ribosomal protein L4 
Protein accessionYP_496528 
Protein GI87199271 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.919527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGTTC AGGTCCTCAA TCTCGACGGC ACCGCCGGCA AGGGCGAAGT GGAACTGTCG 
GACGACGTGT TCGGTCTCGA ACCGCGCGCC GACATCCTGC ACCGCGTTGT CACCTGGCAG 
CTCGAAAACC GTCGCGGCAT CGCCCGCAAG GCGCGTGAGC GTTCGGACGT TGCCCGCACC 
GGCAAGAAGT TCGGTCGCCA GAAGGGCGGC GGTACGGCTC GTCACGGTGA CCGCAAGGCG 
CCGATCTTCA TCGGCGGTGG CAAGGCCCAC GGTCCGCGCG TTCGCGAGTT CAACATCTCG 
CTGAACAAGA AGGTTCGCGC GCTCGGCCTC AAGATGGCGC TTTCGAGCAA GGCCAAGGCC 
GGTCTGGTCG TCGTCGACAA CCTCGACGTC GATGCCAAGA CCAAGGCTCT GGTCGGTCAG 
CTCGCCAAGG CGAACTGGGG CAAGAAGGTG CTCGTGATCG ACGGTGAAGG CGTCAACGAC 
AACTTCGCCA AGGCCGCCCG CAACATCGTC GGCGTGAACG TCCTCCCTGC GATCGGCGCG 
AATGTCTACG ACATCCTGAA GCATGACACG CTGGTGCTGA CGCGCGCTGC TGTCGAAAAG 
CTGGAGGCGC GTTTCAATGG CTAA
 
Protein sequence
MKVQVLNLDG TAGKGEVELS DDVFGLEPRA DILHRVVTWQ LENRRGIARK ARERSDVART 
GKKFGRQKGG GTARHGDRKA PIFIGGGKAH GPRVREFNIS LNKKVRALGL KMALSSKAKA 
GLVVVDNLDV DAKTKALVGQ LAKANWGKKV LVIDGEGVND NFAKAARNIV GVNVLPAIGA 
NVYDILKHDT LVLTRAAVEK LEARFNG