Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1249 |
Symbol | rplC |
ID | 3917880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1298719 |
End bp | 1299474 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640443985 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_496527 |
Protein GI | 87199270 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACCG GCGTGATCGC GAAGAAGGTG GGTATGACCC GCCTTTTCCA GGAAGATGGT CGGCACGTGC CGGTTACCGT CCTGTCGCTA GAAAATTGCC AGGTGGTTTC GGTTCGCACC GCTGAGCGTG ACGGTTACGT CGCTCTCCAG CTCGGTGCTG GCGAAGCCAA GCAGAAGAAC GTTGCCAAGC CGCAGCGCGA ACACTTCGCC AAGGCCGAAG TTCCGCTGAA GATGGAAGTC GCCGAGTTCC GCGTCGCCGA TGACGCGCTG CTTGATGTCG GCTCGACCAT CGCCGCTTCG CACTTCGTCC CTGGCCAGTA TGTCGACATC ACCGGCCAGA CCCAGGGCAA GGGCTTCCAG GGCGCTATGA AGCGCTGGGG CTTCGGCGGT ATGCGCGCCA CCCACGGTGT CTCGATCTCG CACCGTGCCC ACGGTTCGAC CGGTAACCGC CAGGATCCTG GCCGCGTCTT CAAGAACAAG AAGATGGCCG GTCACATGGG CGACCGTCAG CGCACCCAGC AGAACCTCGA AGTCGTCCGC ACCGACGACG AGCGTGGCCT GATCTTCGTC AAGGGTTCTG TCCCCGGTTC GAAGAACGCC TGGCTCCTCG TGCGCGACGC CGTGAAGGTC TCGCGCCACG CTGAAGCGCC CTATCCCGCA GGCCTGAAGC AGGCCGCCAA CAGCAATGAC TCGGCAGCTG CCGACACCCC GGCGGAAGTC GCGGCTGTCG AAGCCACCGA AGGTCAGGAG GGCTAA
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Protein sequence | MRTGVIAKKV GMTRLFQEDG RHVPVTVLSL ENCQVVSVRT AERDGYVALQ LGAGEAKQKN VAKPQREHFA KAEVPLKMEV AEFRVADDAL LDVGSTIAAS HFVPGQYVDI TGQTQGKGFQ GAMKRWGFGG MRATHGVSIS HRAHGSTGNR QDPGRVFKNK KMAGHMGDRQ RTQQNLEVVR TDDERGLIFV KGSVPGSKNA WLLVRDAVKV SRHAEAPYPA GLKQAANSND SAAADTPAEV AAVEATEGQE G
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