Gene Saro_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1249 
SymbolrplC 
ID3917880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1298719 
End bp1299474 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content64% 
IMG OID640443985 
Product50S ribosomal protein L3 
Protein accessionYP_496527 
Protein GI87199270 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCG GCGTGATCGC GAAGAAGGTG GGTATGACCC GCCTTTTCCA GGAAGATGGT 
CGGCACGTGC CGGTTACCGT CCTGTCGCTA GAAAATTGCC AGGTGGTTTC GGTTCGCACC
GCTGAGCGTG ACGGTTACGT CGCTCTCCAG CTCGGTGCTG GCGAAGCCAA GCAGAAGAAC
GTTGCCAAGC CGCAGCGCGA ACACTTCGCC AAGGCCGAAG TTCCGCTGAA GATGGAAGTC
GCCGAGTTCC GCGTCGCCGA TGACGCGCTG CTTGATGTCG GCTCGACCAT CGCCGCTTCG
CACTTCGTCC CTGGCCAGTA TGTCGACATC ACCGGCCAGA CCCAGGGCAA GGGCTTCCAG
GGCGCTATGA AGCGCTGGGG CTTCGGCGGT ATGCGCGCCA CCCACGGTGT CTCGATCTCG
CACCGTGCCC ACGGTTCGAC CGGTAACCGC CAGGATCCTG GCCGCGTCTT CAAGAACAAG
AAGATGGCCG GTCACATGGG CGACCGTCAG CGCACCCAGC AGAACCTCGA AGTCGTCCGC
ACCGACGACG AGCGTGGCCT GATCTTCGTC AAGGGTTCTG TCCCCGGTTC GAAGAACGCC
TGGCTCCTCG TGCGCGACGC CGTGAAGGTC TCGCGCCACG CTGAAGCGCC CTATCCCGCA
GGCCTGAAGC AGGCCGCCAA CAGCAATGAC TCGGCAGCTG CCGACACCCC GGCGGAAGTC
GCGGCTGTCG AAGCCACCGA AGGTCAGGAG GGCTAA
 
Protein sequence
MRTGVIAKKV GMTRLFQEDG RHVPVTVLSL ENCQVVSVRT AERDGYVALQ LGAGEAKQKN 
VAKPQREHFA KAEVPLKMEV AEFRVADDAL LDVGSTIAAS HFVPGQYVDI TGQTQGKGFQ
GAMKRWGFGG MRATHGVSIS HRAHGSTGNR QDPGRVFKNK KMAGHMGDRQ RTQQNLEVVR
TDDERGLIFV KGSVPGSKNA WLLVRDAVKV SRHAEAPYPA GLKQAANSND SAAADTPAEV
AAVEATEGQE G