Gene Saro_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1230 
Symbol 
ID3917861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp1282400 
End bp1283035 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content67% 
IMG OID640443967 
ProductGTP cyclohydrolase 
Protein accessionYP_496509 
Protein GI87199252 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.112784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTGC TCTCCCCATC CCTCGCCGCG TCGTCCGGCA TGGCCGACGT GATCGGCGAG 
GACGGCAAGA TCGTGGTGCC GGCCGACGTC GAGGAGGCGA TCCGCACCCT CATCCGCTGG 
TCAGGCGACC AGCCCGAGCG CGAAGGCCTG CTCGACACGC CCAAGCGCGT GGCGCGGGCC 
TGGCGGGAAT ATTGCAGCGG CTATGCTCAG GACCCGGGGC TTCACCTGTC CCGCACGTTC 
GAGGAAGTCG GCGGCTACGA TGAAGTCGTG CTGTTGCGCG ACATCCCCTT TCAGAGCCAC 
TGCGAACACC ACATGGCGCC GATCACCGGG ACCGCATCGA TCGCCTACCT GCCCCGCGAC 
CGGGTGGTCG GCATCTCGAA GCTCGCCCGC GTACTGCACG GATTTGCGCA GCGGCTGCAG 
GTGCAGGAAC GGCTGACCGC GGAAGTGGCG CAATGCATCT GGGACAATCT CAAGCCGCAC 
GGCGTCGCGG TGGTGATCGA GGCGCAGCAT GGCTGCATGA CCGGGCGCGG CGTCAGGACG 
CACGGCGTGG GCATGGTTAC CAGCCGGATG CTCGGCTGCT TCCTCGATGA CGCGAGCAGC 
CGCAAGGAAG TTCTGGCCCT GATGGGACGG GGTTGA
 
Protein sequence
MNVLSPSLAA SSGMADVIGE DGKIVVPADV EEAIRTLIRW SGDQPEREGL LDTPKRVARA 
WREYCSGYAQ DPGLHLSRTF EEVGGYDEVV LLRDIPFQSH CEHHMAPITG TASIAYLPRD 
RVVGISKLAR VLHGFAQRLQ VQERLTAEVA QCIWDNLKPH GVAVVIEAQH GCMTGRGVRT 
HGVGMVTSRM LGCFLDDASS RKEVLALMGR G