| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1220 |
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| Symbol | |
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| ID | 3916518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1271788 |
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| End bp | 1273191 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640443957 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_496499 |
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| Protein GI | 87199242 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.373524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGC GCCCGATCCT CGCCGCGCTT CCGGCACTGG CGCTCGCGGG TTGCAATCTT
GCGCCCAAGT ACGTGCAGCC CGCTGCGCCG GTGCCGCCGG CTCTGCCGCA AGGCGGAGCC
TACCCCGGTC TAGCCCCCGG CGAGACGGAC GCCGATGCGC TGGGCTGGCG CGATTTCTTT
GCCGATGCAC GCCTGCAGCA GGTGATCGCC AAGGCTCTTG CCGACAACCG CAACCTGCGC
GCGACGCTTG CCAACGTAGA GCGGGCGAGG GCGCTCTACC GTGTGGACCG CGCGGCGCTG
TTCCCCATCG TCAACGCGAC CGGCACGCTG TCGGCGGTGC AGGGCACCGC AGGGCGGGTG
ACCGACAACT TCCTCGTCCA GGCGGGGACC AGTGCCTACG AGATCGACCT GTGGGGCCGG
CTTCGCAACC AGAGCCAGAG TGCGTTCGAA AGCTATCTCG CGACGGACGA AGGGCGCAAG
GCAACGCAGA TCGCGCTGGT GGCCGAAACA GCAAGCGCGT GGCTGTCCTA TGCGGCCACC
GCCGATGCCC TGCGCATTGC CGAGGAAACC GTGGCATCCC GGCGCAGGAC GCTCGACGTC
AATGTCCGGC GCGAAGCCAA CGGGATCGGT ACGAAGCTTG ACGTGGCCAC GGCGACCACG
GCGCTCAACA GCGCCGAAGC CGCAGTGGCA GACTTCCGCA CCAGCCTGGC CCAGGCTCGC
AATGCGCTGG AACTGATCGC GGGCGGTCCG TTACCGGACG AGCTTCTGCC TTCGACGTTA
GGCGAGGGCG ACCAGGTTCG CGCCGAGCTG CCCGTCGGCC TGTCCTCGCA GGTGCTGCTG
CGCAGGCCCG ACGTTCTCGC TGCGGAGCAC GACCTGAAGG CGACCTACGC CGACATTGGC
GCGGCGCGGG CGGCGTTCTT TCCGACGCTA TCGCTAACCG GCTTGTTCGG GTTCGCCAGT
TCCGGGCTGA CGAGCATCTT CAGCGGTGGC GACTTCCAGA AGACGGCCAA TGCGGCCTTG
CGCCAGCGGA TCTTCGATGG CGGGGCGACG GCGGGCAATC TTGCGGCGGC CAAGGCCGCG
CGCGATGCGG CGCTCGCGAC CTATGAGAGG ACGATCCAGA CGGCCTTCCG CGAAGTGGCG
GACGCGCTGG CGCGGCGCGG GACCATCGAC GAGAGTGTGA GGGCGCAGAC TTCGCTCGAG
GCCAATGCGG CGACCGCGTA CCGCCTGAGC CAGTCACGCT ACGATGCCGG TGTTGCCAGC
TATCTCGAAC CGCTCGACGC CCAGCGCACG CTCTACAATG CGCGGCAGTC GCTGGTTTCG
GTGCGGCTCA CGAAAGCGAG CAACATGGTC GAGCTGTACC GTGCGCTGGG AGGCGGATTG
GTGGAAGTGA CGAAGCCTCA GTAG
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| Protein sequence | MNMRPILAAL PALALAGCNL APKYVQPAAP VPPALPQGGA YPGLAPGETD ADALGWRDFF
ADARLQQVIA KALADNRNLR ATLANVERAR ALYRVDRAAL FPIVNATGTL SAVQGTAGRV
TDNFLVQAGT SAYEIDLWGR LRNQSQSAFE SYLATDEGRK ATQIALVAET ASAWLSYAAT
ADALRIAEET VASRRRTLDV NVRREANGIG TKLDVATATT ALNSAEAAVA DFRTSLAQAR
NALELIAGGP LPDELLPSTL GEGDQVRAEL PVGLSSQVLL RRPDVLAAEH DLKATYADIG
AARAAFFPTL SLTGLFGFAS SGLTSIFSGG DFQKTANAAL RQRIFDGGAT AGNLAAAKAA
RDAALATYER TIQTAFREVA DALARRGTID ESVRAQTSLE ANAATAYRLS QSRYDAGVAS
YLEPLDAQRT LYNARQSLVS VRLTKASNMV ELYRALGGGL VEVTKPQ
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