| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1208 |
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| Symbol | |
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| ID | 3916506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1255008 |
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| End bp | 1256687 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640443945 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_496487 |
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| Protein GI | 87199230 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.397312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTCG ATGCGATCGT GGTAGGCTCG GGTATCACCG GCGGCTGGGC AGCCAAGGAA
CTGACGCAGG CGGGCCTAAA GGTCCTGATG ATCGAGCGCG GGCGCGAGAT CGTCCACGGC
GATTACCCGA CCGAGATGAA GACGCCCTGG GAGATGCCGT TTCGCGGCGT GGGCGATGCC
GCGCTTTATG CGCGCGAATA CCAGGTGCAG GCGCAGAACC GCCATTTCAA CGAGTTCACG
CAGGGGCACT TCGTCAACGA CAAGGAGAAC CCCTACGCCA CTGGTCCGGA CAGCGAGTTC
AACTGGCTGC GGTCCTATCA GCTTGGCGGA CGCTCGCTGA CCTGGGGGAG GCAGGCCTAT
CGCTGGTCGG ACTACGATTT CAGCGCCAAC AAGCGCGACG GCAACGGCAC TGACTGGCCG
ATCCGCTACG CCGACCTGGC TCCATGGTAC GACAAGGTCG AGGAGTTCAT CGGCGTTTCC
GGCGCGGCGG AGGGCCTGCC GCAGCTTCCC GACGGCCGGT TCCAGCCGCC GATGGCGCTG
AACGCCGTGG AGCGTCACGT CCGGCAGGTC GTGGCGGACA GGTATGGTCG CTGCATGACG
GTCGGTCGTG TCGCCAACAT GACCCAGGCC AAGCCGGACG AGGGCCGCTC CGCCTGCCAG
AACCGTTCGA TCTGTGCGCG CGGTTGCTCG TACGGGGCAT ATTTCTCGAC GCAATCGAGC
ACGCTGCCGG CGGCCAAGGC CACGGGCAAC CTGACCGTGG TCACCGATGC CATCGTCGAG
CATGTCGACT ACGATCCGGC GACGAAGCGC GTGACCGGCG TGCGCTATGT GAACACCAAG
GACGGTTCGC GCGGTAGCGC CACCGCGCGC ATGGTGTTCC TCAACGCCAG TGCATTCAAT
TCGGTGCACG TGCTGCTGAA TTCGCGTTCC GAGGCGATGC CGAACGGGCT GGGCAATTCG
AGCGGCGTTC TGGGCACGCA GATCATGGAC CACGCCAACA CGCTGTCGAC GATTGCGCTG
TTCCCGCAGT TCAACGGCCG CACCAGTTTC GGCAACCGGC CGACGGGCGT GGTCATCGCG
CGCTATCGCA ACATGGACGA GATGGACGGT GCGGGGCACA CGCGTGGCTA TTCGTACCAG
GGCGGCGCAT TGCAGAGCAA CTGGGGCGCG GGCAAGCGCG AGGCGGGCAT CGGCGCCGAC
TTCAAGGACA AGCTGCGTAC GCCGGGCATG TGGCGCATGG TGCTGGTCGC CTTCGCCGAC
TGCGTCCCGC GCGACAGCAA CCGCCTGACG CTGGACCCGG TGAAAACCGA CCGCTTCGGC
ATTCCCCAAC TCCGCATCGA CTTCGCCTAT GGCAAGGAAG AGCAGGCAGC ACTTGCCCAG
GCCAAGGCCG ATGCCGCCGA AATGATGACG GCGGCGGGCG GCATGGTCGT CATGGGTTCG
GACCAGCCCG GCACCGGTGG CATGGCGATC CACGAGATGG GCGGCGCGCG CATGGGCCAC
GACCCGAAGA CCTCGGTGCT CAACAAGTGG AGCCAGAGCC ACGACGTCGC CAACCTGTTC
GTCACCGACG GCGCGCAGAT GGCGTCCTCG GCCTGCCAGA ACCCTTCGCT CACCTACATG
GCGCTGACCG CACGTGCCTG CGATGCGGCG GTCAGGATGC TGCGCGAAGG TGCGATCTGA
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| Protein sequence | MQFDAIVVGS GITGGWAAKE LTQAGLKVLM IERGREIVHG DYPTEMKTPW EMPFRGVGDA
ALYAREYQVQ AQNRHFNEFT QGHFVNDKEN PYATGPDSEF NWLRSYQLGG RSLTWGRQAY
RWSDYDFSAN KRDGNGTDWP IRYADLAPWY DKVEEFIGVS GAAEGLPQLP DGRFQPPMAL
NAVERHVRQV VADRYGRCMT VGRVANMTQA KPDEGRSACQ NRSICARGCS YGAYFSTQSS
TLPAAKATGN LTVVTDAIVE HVDYDPATKR VTGVRYVNTK DGSRGSATAR MVFLNASAFN
SVHVLLNSRS EAMPNGLGNS SGVLGTQIMD HANTLSTIAL FPQFNGRTSF GNRPTGVVIA
RYRNMDEMDG AGHTRGYSYQ GGALQSNWGA GKREAGIGAD FKDKLRTPGM WRMVLVAFAD
CVPRDSNRLT LDPVKTDRFG IPQLRIDFAY GKEEQAALAQ AKADAAEMMT AAGGMVVMGS
DQPGTGGMAI HEMGGARMGH DPKTSVLNKW SQSHDVANLF VTDGAQMASS ACQNPSLTYM
ALTARACDAA VRMLREGAI
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