Gene Saro_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1202 
Symbol 
ID3916499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1249534 
End bp1251357 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content68% 
IMG OID640443938 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_496481 
Protein GI87199224 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.10337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGAA TCATCGGAAT CGTCGGCAAG GAACAGGTTG CGGACCGGCT GGTCGACGGC 
CTGCGGCGGA TGGAATACCG CGGCTATGAC AGCGCCGGCG TGTGCACCGT GGAAGGCGGC
CGGCTGATCC GCCGTCGCGC CGAGGGCAAG CTGAACAACC TGGTCGCGGA ACTGGTGCGC
AATCCCGCGT CGGGCCTGAT CGGCATCGCG CATACTCGCT GGGCGACGCA CGGCGCACCG
ACCACCAGCA ACGCGCACCC CCATGCGACC GACGAGGTGG CGCTGGTCCA CAACGGCATC
ATCGAGAACT TCAAGCCGCT GCGCGAAGCC CTGATCGCGC GGGGGCGCAG GTTCGAGAGC
GAGACCGATA CCGAAGTGAT CGCGCACCTG GTGTCCGAGC AGGTCGAGGC GGGGCTTTCG
CCGCAGGATG CGGTGAAGGC GGTACTGCCG CAACTGCGCG GCGCATTCGC CATCGCCGTG
GCCTTTCGCA GCCACGACGA CATGCTGATC GGCGCGCGCC TGGGCTCGCC GCTGGTGGTT
GGGTATGGCG AAGGCGAGAC CTATCTGGGA TCGGACGCCA TCGCCCTGGC GCCGCTGACC
CAGCGCATCG CCTATCTGGA GGAAGGCGAC TGGGTCGTCG TCAAGCGCGA GGGCGCGCAG
ATCTTCGATG CCGAGAACAA GCCGGTCACG CGCCCGATCG TGGCTTCGGG CGCGACGGCG
GCGGCGATCG AGAAGGGCAA CTATCGCCAC TTCATGCAGA AGGAAATCTT CGAGCAGCCC
GCCGTCGTCG CCCAGACCTT GCGCAGCTAC CTGCGCCGCG TGGAGCAGAC CGTGGCGCTG
CCACAGATCG ACTTCGACCT TGCCAGCATC AACCGCGTCA CCATCGTCGC CTGCGGGACG
AGCTACTATG CCGGCATGGT GGCGAAGTAC TGGTTCGAAC AGTTCGCCCG CCTGCCGGTG
GACATCGACG TGGCATCCGA GTTCCGTTAC CGCGACCCGG TGCTCGAGCC GGGCGGGCTG
GCGCTGTTCA TCTCGCAGAG CGGCGAGACC GCCGATACGC TGGCGGCGCT GCGCCACTGC
AAGGCGGCCG GACAGACCAT CGCGGTCGTC GTCAACGTGC CGACAAGCTC GATGGCGCGC
GAGGCGGACC TGCTGCTGCC GACCCACGCG GGCCCGGAAA TCGGCGTCGC TTCGACCAAG
GCGTTCACCT GCCAGCTTGC CGTCCTCGCC GCGCTCGCCG CGCACCTTGC AGTAAAGCGC
GGGCGGCTGA CGCGCGAGGA GGAGGCGGCC ATCGTAGAGC AGCTTGTCGA GACGCCGGCC
GCGCTCAATG CCGCGCTTTC GCACGACGAG GAAATCGCGG GCATGGCCCA CCTCATCGCG
CCCGCGCGCG ACGTGCTCTA CCTCGGGCGC GGGCCGGACT ATCCGCTGGC GCTGGAAGGC
GCGCTCAAGC TCAAGGAAAT CAGCTACATC CATGCCGAGG GTTACGCCTC GGGCGAGATG
AAGCACGGGC CCATCGCGCT GATCGACGAG GCCGTGCCGG TGATCGTGCT GGCGCCGAGC
GGCCCCCTGT TCGAGAAGAC GGTCAGCAAC ATGCAGGAAG TGCGGGCGCG GGGCGGCAAG
ATCGTGCTCA TTTCCGACGC GGAAGGGCTG GCCGAGGCGG GCGAGGGGTG CCTCGCCACG
ATCGAAATGC CGAAGGTCCA CCCGCTGATC GCGCCGCTGG TCTACGCCGT GCCGGTGCAG
CTTCTCGCCT ACCACGTGGC CGTGGCCAAG GGCACCGACG TCGACCAGCC GCGCAACCTT
GCCAAGAGCG TGACGGTGGA GTGA
 
Protein sequence
MCGIIGIVGK EQVADRLVDG LRRMEYRGYD SAGVCTVEGG RLIRRRAEGK LNNLVAELVR 
NPASGLIGIA HTRWATHGAP TTSNAHPHAT DEVALVHNGI IENFKPLREA LIARGRRFES
ETDTEVIAHL VSEQVEAGLS PQDAVKAVLP QLRGAFAIAV AFRSHDDMLI GARLGSPLVV
GYGEGETYLG SDAIALAPLT QRIAYLEEGD WVVVKREGAQ IFDAENKPVT RPIVASGATA
AAIEKGNYRH FMQKEIFEQP AVVAQTLRSY LRRVEQTVAL PQIDFDLASI NRVTIVACGT
SYYAGMVAKY WFEQFARLPV DIDVASEFRY RDPVLEPGGL ALFISQSGET ADTLAALRHC
KAAGQTIAVV VNVPTSSMAR EADLLLPTHA GPEIGVASTK AFTCQLAVLA ALAAHLAVKR
GRLTREEEAA IVEQLVETPA ALNAALSHDE EIAGMAHLIA PARDVLYLGR GPDYPLALEG
ALKLKEISYI HAEGYASGEM KHGPIALIDE AVPVIVLAPS GPLFEKTVSN MQEVRARGGK
IVLISDAEGL AEAGEGCLAT IEMPKVHPLI APLVYAVPVQ LLAYHVAVAK GTDVDQPRNL
AKSVTVE