Gene Saro_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1188 
Symbol 
ID3916485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1231395 
End bp1232357 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content71% 
IMG OID640443924 
Producttransport system permease protein 
Protein accessionYP_496467 
Protein GI87199210 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCGCC TGATCGCCAT CCTCCTCGCC GCCCTTGCGA TCGCCCTGCC GCTCTCGCTG 
CTCGCCGGGC AGGTATGGAT CGATCCCTTC GGTCCGCCGG TCCCCAACGC CACCGCGATC
CTGATGGAAC TGCGCCTTCC GCGCGCCATT CTCGCGCTCG TTCTTGGTGC CGGACTCGGC
GCTGCGGGCG CGGCGATGCA GGGTTACTTG CGCAATCCGC TCGCCGACCC GGGCCTGTTC
GGCATAGCGC CCGCCGCCGC GCTCGGCGCG GTCCTGTCCT TCTACACCGG CTACGAGGTG
CAGGCCTTTA CCCTCCCGCT TTTCGCGCTG GCCGGAGGCG CCGGCGCCAT GGCGCTGCTC
GCGCTCATCG CCGGGCGTAG CGGAGGCATC GCGCTGTTCA CGCTGGCGGG CATGATGATC
GCCAGCCTGG CCGGCGCGCT CACCAGCCTC GCCATAAGCC TCTCGCCCAA TCCCTTCGCC
CTGTCGGAAA TCGTGACCTG GCTCATGGGC GCGCTGGCCG ATCGTGGCTG GCACGAGGTG
CGCCTCGCGG CTCCACTGAC CCTCGCCGGC CTCGCGATCC TCTGGCGCGC AGCCCCCGGC
CTCGATGCGC TGGCGCTGGG CGAACCCGCC GCCCGCTCGC TCGGGGTCGA TCCGGCGCGG
CTGCTCTGGC TGATGATCGC GGGCGTCGGC CTTGTCGTCG GCAGCGGTGT CGCGGTCGCG
GGGATGATCG GCTTTGTCGG CCTCATGGTC CCCCATTTCG TGCGCCCCTT CACCGACCAG
CGCCCCTCGG CAACACTCGT GCCCTCTGCG CTTGCCGGCG CGCTGCTCCT GCTGGTGGCG
GATTGCCTCT GCCGCATCCT GCCGCTTGCC GGTGGCGAAC TGCGCCTGGG TATCGCGCTG
AGCATCGCGG GCGCTCCGTT CTTCCTGCGG CTTCTGCTGC GCATGCGACG GGATCTGGCC
TGA
 
Protein sequence
MNRLIAILLA ALAIALPLSL LAGQVWIDPF GPPVPNATAI LMELRLPRAI LALVLGAGLG 
AAGAAMQGYL RNPLADPGLF GIAPAAALGA VLSFYTGYEV QAFTLPLFAL AGGAGAMALL
ALIAGRSGGI ALFTLAGMMI ASLAGALTSL AISLSPNPFA LSEIVTWLMG ALADRGWHEV
RLAAPLTLAG LAILWRAAPG LDALALGEPA ARSLGVDPAR LLWLMIAGVG LVVGSGVAVA
GMIGFVGLMV PHFVRPFTDQ RPSATLVPSA LAGALLLLVA DCLCRILPLA GGELRLGIAL
SIAGAPFFLR LLLRMRRDLA