| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1180 |
|---|
| Symbol | sucA |
|---|
| ID | 3916477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 1219865 |
|---|
| End bp | 1222717 |
|---|
| Gene Length | 2853 bp |
|---|
| Protein Length | 950 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640443916 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_496459 |
|---|
| Protein GI | 87199202 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCTG AACTGCACGA TTTCGACGTG GATCCCGCTC AGGAAGGTCC GCAGCCCGGT
CCTTCGTGGC AGAGCAAGCG CTGGCCGATC ACCGATGCGG CGGCGGGCGA CGACCTGACC
CAGGCGATGG ACCCGATGGC GCTCAGGCTC GTCATCCAGA AGTCCGCGAA GAAGGGCGGC
GCGCCGCTCG ACGAGGCCGC GCTGCAGCAG GCCGCGATGG ACGCGATCCG CGCGATGACC
CTGATCCGCA CGTACCGCGT GCGCGGGCAT CTCGCCGCCG ACCTCGACCC GCTGGGCCTT
GCCCGCCAGA AGCTGCCGGC CGACCTTTCG CCCGAATACT ATGGCTTCAC CGCCGCCGAC
ATGACCCGCA AGGTCTATCT CGGCGGGGCG CTGGGGCTGG AATGGGCGAC GGTGAACGAA
CTCGTCGCGA TCCTGCGCGC CAACTACTGC GGGCATGTTG GCTTCGAGTA CATGCACATC
TCCGACGTGG AGGAGCGCCG CTTCATCCAG GACCGCATCG AGGGCGGCGA CAAGTCGATC
GACTTCACCC CCAACGGCAA GAAGGCGATC CTCGCCGCTG TCGTTCGCGG CGAGCAGTAC
GAGAAGTTCC TCGGCAAGAA GTACGTCGGC ACCAAGCGCT TCGGCCTCGA CGGCGGCGAA
TCGATGATCC CGGCGCTGGA AGCGCTGATC AAGTACGGCG GGCAGCTCGG CGTGCGCGAG
ATCGTCTACG GCATGGCCCA CCGCGGTCGC CTCAACGTAC TCGCCAACGT GATGGCCAAG
CCCTATCGCG TGATCTTCCA CGAGTTCTCG GGCGGATCGG CCAACCCCGA GGACGTGGGC
GGATCGGGCG ACGTGAAGTA CCACCTCGGC ACCTCGACCG ACCGCGAGTT CGACGGGATC
AAGGTTCACA TGAGCCTGGT GCCCAACCCC TCGCACCTCG AGACGGTCGA TCCGGTGGTG
CTCGGCAAGG TCCGCGCGCA GCAGGTCTTC CGCGACGACA TCGGTGACGA TGTGGGCCCC
GACGCGCGCC ACAAGCAGGT CCTGCCCGTG CTGATCCACG GCGACGCGGC CTTTGCCGGA
CAGGGCATCG TGTGGGAGTG CTTCGGCCTT TCGGGCGTGA AGGGCTACAA CACCGGCGGT
TGCATCCACT TCATCATCAA CAACCAGATC GGCTTCACCA CCAGCCCGCA GTTCTCGCGC
GGGTCGCCCT ACCCCTCGGA CGTCGCCAAG GGCGTCCAGG CGCCGATCAT CCACGTCAAC
GGCGACGATC CGGAAGCCGT GACCTTCGCC TGCAAGCTGG CGATCGACTA CCGCCAGAAG
TTCGGCCGCG ACATCGTGGT CGACATGTGG TGCTACCGCC GCTTCGGCCA CAACGAAGGC
GACGAGCCTT CGTTCACCCA GCCGCTGATG TACGCGAAGA TCCGCCAGCA TCCGGGCGTG
AGCGACATCT ACGCCAAGCG CCTCGTCGCC GAGGGCGTGA TCGACGCGAA CCACAAGGGC
GAGGTCGAAA GCCACTTCAC CGCGACGCTC GAGACCGAGT TCGAGGCGTC CAAGGGCTAC
AAGGCCAACG AGGCCGACTG GTTCGGCGGT CGCTGGTCGG GGCTGAACAA GCCCGCCGAC
CCCGTCACCG CGCGCCGCAA CGTGGCGACC GGCATCGACC AGAAGATGTT CGACAGCCTG
GGCCGCACGC TGACCACCGT CCCCGAGGAC CTGACCGTCC ACAAGACGCT GGGCCGCGTG
ATCGACGCCA AGCGCGAGAT GTTCACGAGC GGACAGGGCT TCGACTGGGC GACCGGCGAG
GCACTGGCGT TCGGCAGCCT CGTGATGGAA GGCTATGGCG TGCGCCTCTC GGGCCAGGAC
TGCGGACGCG GCACCTTCAG CCAGCGCCAC GCGGTGTGGG TCGACCAGAA GGACGAGCGC
AAGTACGTGC CGCTGACGAC GCTGCCGCAC GGCTCGTTCG AGGTGCTCGA CAGCCCGCTT
TCCGAATATG GCGTGCTCGG CTTCGAGTAT GGCTATGCCA GCGCCGACCC GAAGAGCCTG
GTGCTGTGGG AAGGCCAGTT CGGCGACTTC GCCAACGGCG CGCAGATCGT GATCGACCAG
TACATCGCCG CATCCGAAGC CAAGTGGCTG CGCGCCAACG GCCTCGTCAT GCTGCTGCCG
CACGGGTACG AAGGCCAGGG GCCGGAGCAT TCGTCGGCAC GTCTGGAGCG CTATCTGCAG
CTCTGCGCGG AAGACAACCT CCAGGTGTGC AACATCACCA CGCCGGCCAA CTACTTCCAC
GTGCTGCGCC GGCAGATGCA CCGTCCGTTC CGCAAGCCGC TCATCATCAT GACGCCCAAG
AGCCTGCTGC GCCACCCGAT GGCAAAGTCG GTCGCTTCGG ACTTCATCGG CGAAGGGCAC
TTCATGCGCA TCCTTTCGGA CACGAACGGC GCGGCGGACA AGGACACCCG CCGGGTCGTG
CTGTGTTCGG GCAAGGTCGC ATACGACCTG ATCGAGGCGC GCAACGCGGC CGAGCTTGCG
GACGTACAGG TCATCCGCCT CGAGCAGCTC TACCCCTTCC CCGGCGAGCC CCTGGCCCTG
CGCCTTTCGC GCATGCCCAA CCTCGAGGAA GTGGTGTGGT GCCAGGAAGA GCCGAAGAAC
AACGGTTCGT GGTTCTTCGT CGAGCCGCTG ATCGAGGAAT CGCTGAAGGC CGCGAAGAGC
AAGGTGGCGC GCCCGCGTTA TGCAGGTCGC CACGCCTCGG CATCGCCCGC AACGGGCCTC
GCCAGCCGTC ACGCCAGCGA GCAGGGCGCG CTTGTCGCCG ATGCGCTTGG CCTGTCGGTT
CGCGGCGAGA TCCGTCGCCA GAAGAAGCAT TGA
|
|---|
| Protein sequence | MGSELHDFDV DPAQEGPQPG PSWQSKRWPI TDAAAGDDLT QAMDPMALRL VIQKSAKKGG
APLDEAALQQ AAMDAIRAMT LIRTYRVRGH LAADLDPLGL ARQKLPADLS PEYYGFTAAD
MTRKVYLGGA LGLEWATVNE LVAILRANYC GHVGFEYMHI SDVEERRFIQ DRIEGGDKSI
DFTPNGKKAI LAAVVRGEQY EKFLGKKYVG TKRFGLDGGE SMIPALEALI KYGGQLGVRE
IVYGMAHRGR LNVLANVMAK PYRVIFHEFS GGSANPEDVG GSGDVKYHLG TSTDREFDGI
KVHMSLVPNP SHLETVDPVV LGKVRAQQVF RDDIGDDVGP DARHKQVLPV LIHGDAAFAG
QGIVWECFGL SGVKGYNTGG CIHFIINNQI GFTTSPQFSR GSPYPSDVAK GVQAPIIHVN
GDDPEAVTFA CKLAIDYRQK FGRDIVVDMW CYRRFGHNEG DEPSFTQPLM YAKIRQHPGV
SDIYAKRLVA EGVIDANHKG EVESHFTATL ETEFEASKGY KANEADWFGG RWSGLNKPAD
PVTARRNVAT GIDQKMFDSL GRTLTTVPED LTVHKTLGRV IDAKREMFTS GQGFDWATGE
ALAFGSLVME GYGVRLSGQD CGRGTFSQRH AVWVDQKDER KYVPLTTLPH GSFEVLDSPL
SEYGVLGFEY GYASADPKSL VLWEGQFGDF ANGAQIVIDQ YIAASEAKWL RANGLVMLLP
HGYEGQGPEH SSARLERYLQ LCAEDNLQVC NITTPANYFH VLRRQMHRPF RKPLIIMTPK
SLLRHPMAKS VASDFIGEGH FMRILSDTNG AADKDTRRVV LCSGKVAYDL IEARNAAELA
DVQVIRLEQL YPFPGEPLAL RLSRMPNLEE VVWCQEEPKN NGSWFFVEPL IEESLKAAKS
KVARPRYAGR HASASPATGL ASRHASEQGA LVADALGLSV RGEIRRQKKH
|
|---|
| |