Gene Saro_1173 details

Gene Information

• Locus tag: Saro_1173
• Symbol: leuD
• ID: 3916470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1213375
• End bp: 1213983
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640443909
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_496452
• Protein GI: 87199195
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.981045
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACCGG TGAAGCAGAT CGAGGGACGG GCTATCCCGT TCGGCCGCAA GAACGTCGAT 
ACCGACGTGA TCATTCCCGC CAGGTGGCTC AAGACGATTA CCCGTCAGGG CCTTGGTCGC 
GGTGCGTTCG AGGCGCTGCG CGCCGATCCT GACAACATCT TCGACAGCGC CGAGTTCGCC 
GGCTCGCCGA TCCTCATCGC GGGCGACAAC TTCGGCTGCG GCTCCAGCCG CGAACACGCC 
GCCTGGGCGC TGCTCGACAT GGGCGTGAAG GCGGTCATCG CGCCGTCGTT TTCCGACATC 
TTCTCGGGCA ACGCGTTCAA GAACGGCATC CTCACCGTCG TCCTCCCGCA GGAGGCCATA 
GACCGGCTCA TGGAAGTCGC GCAGACCGAT CCCGTCTCGA TCGACCTCGA GGCGCAGACC 
GTCACCACCC CGTTCCAGGA TCGCTTCTCG TTCGAGATCG ACCCCTTCCG CAAGCACTGC 
CTTGCCAACG GCCTCGACGA GGTCGGCCTG ACCATGGCGC GCGGCGATGC CATTGCCACG 
CACGAGGCCC GAATGCGGGA AAGCCTCCCG TTCCTTGCCA AGGGAACCGA TGCCGTAGCG 
GCAGCTTAA 

 

Protein sequence

MEPVKQIEGR AIPFGRKNVD TDVIIPARWL KTITRQGLGR GAFEALRADP DNIFDSAEFA 
GSPILIAGDN FGCGSSREHA AWALLDMGVK AVIAPSFSDI FSGNAFKNGI LTVVLPQEAI 
DRLMEVAQTD PVSIDLEAQT VTTPFQDRFS FEIDPFRKHC LANGLDEVGL TMARGDAIAT 
HEARMRESLP FLAKGTDAVA AA