| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1147 |
|---|
| Symbol | |
|---|
| ID | 3916444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1195601 |
|---|
| End bp | 1196521 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640443883 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_496426 |
|---|
| Protein GI | 87199169 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAG AATTGCTGGC GATCACCGGT GCCACCGGGT TCGTCGGGCA GGCGGTTCTC
GATTTCGCCG CCCGCGCAGG GATAGAAGTC CGTGCGCTTG CCCGCCGTCC CCAGGAAGCG
CGCGCCGGCG TGGAATGGGT GCAGGGCGAC CTTGACGACA AGCGCGCGCT CCAGCGCCTT
GTCGGCCGCG CCAGCGTGGT CCTGCACATC GCGGGCGTCG TCAATGCTCC CGATCCGCAA
GGCTTCGAGG CCGGCAACGT CCTCGGCACG CTCAACGTCG TCAATGCCGC GCTGGCTGCC
GGTGTGCCGC GCCTCGTCCA CGTTTCCTCT CTCTCCGCCC GCGAGCCGGA CCTGTCGATC
TATGGCAGGT CGAAGTTGCG GGGGGAAAAG ATCGTCAAGG CCAGCAGCCT CGACTGGACC
GTGGTGCGTC CGCCGGCCGT CTACGGCCCG CGCGATACCG AGATGTTCGA GCTGTTCAAG
CTCGCCCGCA GGGGCATCGT GCCGCTGCCG CCGCAGGGCC ACCTCTCGAT CATCCACGTC
AATGACCTGG CGCGTCTGCT CCTCTCGCTC ATCCCCGGCG GCGAGGAGGT GACGCACCTG
ACCTTCGAAC CCGACGACGG CACCACGGGC GGATGGACGA ATACCGAGCT GGCAAAGGCC
ATCGGTGTTG CGGTCGGCAA GCGGGTCACA GCGATGAACC TGCCGGCGGG CCTGCTGCGC
CTCGGCGCGA AGCTCGATGC GCGGTTCCGG GGCAAGGGCG CGAAGCTCAC GATGGACCGT
GTCGGCTACA TGTGCCACCC GGACTGGCGC GCGGGCGAAG GCAACCAGCC GCCGCCTGCG
ATCTGGACCC CCCAGGTCGA AACCCGCATG GGTCTCCACG CCACGGCCGC CTGGTACCGC
GAGGCGGGCT GGCTCAAGTA A
|
|---|
| Protein sequence | MAAELLAITG ATGFVGQAVL DFAARAGIEV RALARRPQEA RAGVEWVQGD LDDKRALQRL
VGRASVVLHI AGVVNAPDPQ GFEAGNVLGT LNVVNAALAA GVPRLVHVSS LSAREPDLSI
YGRSKLRGEK IVKASSLDWT VVRPPAVYGP RDTEMFELFK LARRGIVPLP PQGHLSIIHV
NDLARLLLSL IPGGEEVTHL TFEPDDGTTG GWTNTELAKA IGVAVGKRVT AMNLPAGLLR
LGAKLDARFR GKGAKLTMDR VGYMCHPDWR AGEGNQPPPA IWTPQVETRM GLHATAAWYR
EAGWLK
|
|---|
| |