| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1129 |
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| Symbol | |
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| ID | 3916425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1173865 |
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| End bp | 1175334 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640443864 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_496408 |
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| Protein GI | 87199151 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.401315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCCC ATCCCGCCCT CATCGCCTGG CCCGAGGACC CGTCCGATGC GGCGGGTCTC
GCACTTTGGA CGAGCGAGGA AATCGCTGCT GCGACCGGCG GGCGGGCAAG CGCGCCCTTT
GCCGTCTCGG GCGTCGAGAT CGACAGCCGC GAGGTCGTCG AGGGAGATCT TTTCTTCGCG
CTGAAGGGCG AAAATTCCGA CGGGCATCGC TACCTTGAAG GCGCCTTCGG TCGAGGTGCG
GCAGGCGCTG TCGTGGAGCA TGCCTGTTTC GGGCCGCACG TCCTTGTCTC GAACACTTCA
ACCGCGCTTG AGGATCTTGG AAAAGCCGCG CGAAATCGGG TGGATGCGGG CATTATCGGA
GTCACCGGCT CAGCAGGAAA GACCGGCGTC AAGGAAGCCC TCTATGCCGC GCTGGACCGT
GCGAGCCGGG GGCGCGCGCA CCGTTCCGTC AAGAGCTACA ACAATCACGT GGGCGTTCCG
CTGAGCCTTG CCCGGATGCC TGCGCGTACA AGCTTCGGCG TGTTCGAGAT GGGCATGAAC
CACGCGGGCG AACTGGCGGC ACTGACCCGC TTGGTGCGGC CGCACGTCGC CATCGTCACG
ACCATCGCCC CGGCGCACAT CGGCCACTTC GCCGGCGAGG AAGCCATTGC CGATGCCAAG
GCCGAGATCT TCGAAGGGCT GGAGCCCGGC GGTGTCGCGA TCATCCCGGC GGACAACCGC
CATTTCGAGC ACCTTCGCGC CAAGGCCACG CTGCACGCCG AGCGCGTCAT AAGCTTCGGC
GTCGCCAAGG ACGCGACGGT GCGGCTGCTC GATGCCGTGC CCGCACCGGG TGGCGGCACC
CTCGTCACGG CTGACCTGGG CGGACGCAAG GTCTGCTACA CGATCGCGCA ACCGGGCGAA
CACTGGGTGG CCAATTCGCT GGCGGTCATG GCTGCGGTCG AGGCGATCGG CGGCGATCTG
GGCGCGGCCG GTCTTGCGCT GGCGGAAATG GAAGGCCTTG CCGGACGCGG CGCGCGCCAT
GCCATTCCGG CGCATGGCGG CGACGGATCG GGCAGCGCGC TCCTGATCGA CGAAAGCTAC
AACGCCAATC CCGCGTCGAT GGCGGTGACG TTGCGTCAGC TTGGCCAGAC GCCGGCCGCG
CGCCGCGTCG CCATTCTCGG GGCCATGCGC GAGCTTGGCG CCGACGAGGC GCGCTACCAC
GCGGAGCTTG CCGGCCCGGT CGCGGAAGGC AAAGTCGACA GACTGATCCT GGTGGGCGGC
GAAATGACCG CGCTGGCCGA CGCATTGGGG AAAAGCGGCT CGGCCGCGCT TGCCGGTGCA
ATTGATGTGG CGCATGTGCA AACGGCGGCG GAAGCGGCGG AATGCCTGGC TGCAGATGGC
GTGCGCGGGG GTGACGCCAT CCTCGTCAAG GGGTCGAATT CGGTCGGGCT GGGTGCGCTG
GTGCGCTCGC TCACCGGCAA GGAACGTTGA
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| Protein sequence | MTAHPALIAW PEDPSDAAGL ALWTSEEIAA ATGGRASAPF AVSGVEIDSR EVVEGDLFFA
LKGENSDGHR YLEGAFGRGA AGAVVEHACF GPHVLVSNTS TALEDLGKAA RNRVDAGIIG
VTGSAGKTGV KEALYAALDR ASRGRAHRSV KSYNNHVGVP LSLARMPART SFGVFEMGMN
HAGELAALTR LVRPHVAIVT TIAPAHIGHF AGEEAIADAK AEIFEGLEPG GVAIIPADNR
HFEHLRAKAT LHAERVISFG VAKDATVRLL DAVPAPGGGT LVTADLGGRK VCYTIAQPGE
HWVANSLAVM AAVEAIGGDL GAAGLALAEM EGLAGRGARH AIPAHGGDGS GSALLIDESY
NANPASMAVT LRQLGQTPAA RRVAILGAMR ELGADEARYH AELAGPVAEG KVDRLILVGG
EMTALADALG KSGSAALAGA IDVAHVQTAA EAAECLAADG VRGGDAILVK GSNSVGLGAL
VRSLTGKER
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