Gene Saro_1119 details

Gene Information

• Locus tag: Saro_1119
• ID: 3916415
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1164585
• End bp: 1165160
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640443854
• Product: heme exporter protein CcmA
• Protein accession: YP_496398
• Protein GI: 87199141
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component
• TIGRFAM ID: [TIGR01189] heme ABC exporter, ATP-binding protein CcmA

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.927557
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAGT GCGGTCTCGT CGCCACGGAT ATTGCCTGCC GGCGCGGGGA TCGCATTCTG 
TTCCGCGCGC TGTCGCTGGA CGTGAAGGCG GGCGAGATCG TGCACCTTGC CGGCGCCAAC 
GGCATCGGCA AGTCGAGCTT GATCCGCATC CTTGCCGGAT TGCTGCGTCC CTTTGCCGGA 
ACTGTCGAGC GGCGGGGCGC GATTGCGCTT TCGGACGAAC GGCTGGCGCT CGACGGTCAC 
CTTCCGCTCG AGGATGCGCT GCGCTTCTGG GATCGGATCG ACCGGGCGGG CAGGCCCGAA 
GCGGAGTTCG GGCTCGACGA TCTGCTGGAC GTTCCGGTCC GCTATCTCTC CACCGGGCAG 
CGCAAGCGCG CGGCGCTTGC GCGGGTTGCC GCCAGCGGGG CGCCTTTGTG GTTGCTGGAC 
GAGCCGCTGA ACGGCCTTGA CGTGCATTGG AGCGAGCGGG CGCAGGAGGC GATCGAGGCC 
CATTGCGCGC GCGGCGGGGC AGTGGTCATC GCATCGCATC AGCCGCTCGC GCTCGAGCGC 
GTGCGGACGC TTGCAATCCG GAACTTTCAG CCATGA 

 

Protein sequence

MQECGLVATD IACRRGDRIL FRALSLDVKA GEIVHLAGAN GIGKSSLIRI LAGLLRPFAG 
TVERRGAIAL SDERLALDGH LPLEDALRFW DRIDRAGRPE AEFGLDDLLD VPVRYLSTGQ 
RKRAALARVA ASGAPLWLLD EPLNGLDVHW SERAQEAIEA HCARGGAVVI ASHQPLALER 
VRTLAIRNFQ P