| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1102 |
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| Symbol | |
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| ID | 3916398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1144285 |
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| End bp | 1146414 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640443837 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_496381 |
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| Protein GI | 87199124 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCCG ACCAGGAGCT GGAAGACCTC ATTCCCGATT CGGCGGTGCA GAACCCGGAT
GGGTGGGCGC TGGACACCGA TGCCGCGCGC ACTGGCGCGC CCCCTGCAAG CGTAATCGAG
GAGGTCGAGG CCGACGCCCC CATGCCCGAC CTGCCAGGCA TGACCATCCC CTGGCCCGAT
GGCAGCGACC TGCCGCCGAT CGAGCCGCTT TCGCCTGATC CCGACATAGA CGTCGCCGAA
CAGGCGACCG ATGCCGCCGT CAATGCCCTG CCCGGGCAGG AAGAGGCGGA TGCGCCCGCC
AATGTGCGGC TGGCCGATGC CGATGTGAGG CGCGTGGGCA AGCAGGTCGA ACTGGCTTTT
CCCGTCGGCG CGGAGGCGAT TGCCGACCAG GGCGCGATCA CGGAGCGGTT CGCAGGTCTT
TCCAGCCTCA AGTCCTTCGA CGACGATGAG GACAACCTCG CCCAGATCGT CCGCCGCGCG
CGGACGGACA GGGAGTTGCT GGCCGAGATC ATGCGGGTTC ACGGCTACTA CGACGCGCAG
ATCTACCAGT CCCTGGGCGG GCTGGGCGAC GCGGCCGAAG GCGACGGCAG CGCCCCGATC
GATGTCGAGA AGGTCGTCGT GCGCTACGAT ATCCAGCCCG GTCCGCAGTA CCACTTCGGC
AAGCTGGCAT TCGGGGACCT GGCGGCTAGC GGCCCGGACT ACGATCTTCT GCGCGGCGCC
TTCGAACTCA AGACGGGCGA TGCGATCAAT TCCGACAAGG TCGCGGCCGA GCGCGAGGAT
CTCCGGACCG CGCTGGGCGA AAATGGCTAC GCCTTTGCCA AGGTGGGCGA TCCCGACCTG
CTGATCGATC ACGAAAGGCG CGAGGGCGAC CTGACCTTGC CGGTGACGCC GGGCGGCGTG
TACCGCTTCG GACGCATCGT TTCCTCGCGC GAGAAGTTCC TGAGTTCGCA CCACCTGCAA
CGCATTGCGC GCTTCGATCC AGGCGAGCGC TTCAAGCGTT CGGAAGTCGA TGACCTGCGT
CAGGCGATCC TGGCGACGGG GCTGGTGTCC TCGGTGACGG TCGAGGCGCG CAAGACGGCG
GAGCCTGCGG ACGGCCAGCC GGGCGACGTC GACATCGATG TTGCCCTGAC GCCCGCGCCC
GTGCGCACGA TTGCCGGGCT GGTCGGCTAT TCGAGCGGCG AAGGCTTCCG CGTCGAGGCG
CAATGGGAAC ATCGCAACTT CTTCCCGCCG GAAGGCATGT TGCGCCTGCG CGGCGTGGCT
GGCACGCAGG AGCAGCTTGC GGGCGTAACG TTCCGCCGCA ACAACTTCCT GACCCGCGAC
CTCGTGCTCA ATGCCGACCT CTACGCGCGC AACCAGAAGA GCGACGCCTA TCAGGCGCGC
ACCCTTTCGC TGACCGCCGG GATCGAGCGG CAGACGACCC TGCTGTTCCA GAAGCCGTGG
GTCTTTTCCG CCGGCCTCGA GGCAGTGGCG ACGTCGGAAC GGGACGCGGC GGCGATCCTG
GCAGGCGAGC CCCGCAAGAC CTATTTCGTA GGCGCCCTGC CGATGCGCGC GGCTTATGAC
GGCAGCGACA GCCTGCTCGA CCCGACGCGG GGCTTCCGCG TGGGCCTGCG CCTTTCGCCC
GAGCTTTCGG TGCAGGATGG CGTGAAGTCG ACCTATGGCA AGGTCCAGCT GGACGCCAGC
TACTACCAGC CGTTCGGCGA GAGCGTCGTC ATGGCCGGCC GCGTCCGCCT GGGGACGATT
ACCGGCACCG ACATCGAGAA CATCGCGCCG TCCCGCCGCT TCTATGCGGG CGGCGGCGGA
TCGGTGCGCG GCTATGGCTA CCAGCAGATC GGCCCGCGCG ACACGCTGGG CGAGCCGAGC
GGCGGCCGGG CGCTGACCGA GTTCTCGCTG GAAGCGCGCG TGAAGACCGG GCTGTTCGGC
GGCGCGGTCA GCGTGGTGCC CTTCGTGGAC GCGGGCGCGG TGGATACTTC GACCACGCCG
AAGTTCGATG ACCTCAAGAT CGGTGTCGGT GTCGGCCTGC GCTATCAGAC CAACTTCGGT
CCGATCCGAA TTGACGTGGG CACGCCGCTC AACCCCTCGA AGGGCGACAG CCGCATTGGC
GTCTACGTCG CACTGGGGCA GGCGTTTTGA
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| Protein sequence | MQADQELEDL IPDSAVQNPD GWALDTDAAR TGAPPASVIE EVEADAPMPD LPGMTIPWPD
GSDLPPIEPL SPDPDIDVAE QATDAAVNAL PGQEEADAPA NVRLADADVR RVGKQVELAF
PVGAEAIADQ GAITERFAGL SSLKSFDDDE DNLAQIVRRA RTDRELLAEI MRVHGYYDAQ
IYQSLGGLGD AAEGDGSAPI DVEKVVVRYD IQPGPQYHFG KLAFGDLAAS GPDYDLLRGA
FELKTGDAIN SDKVAAERED LRTALGENGY AFAKVGDPDL LIDHERREGD LTLPVTPGGV
YRFGRIVSSR EKFLSSHHLQ RIARFDPGER FKRSEVDDLR QAILATGLVS SVTVEARKTA
EPADGQPGDV DIDVALTPAP VRTIAGLVGY SSGEGFRVEA QWEHRNFFPP EGMLRLRGVA
GTQEQLAGVT FRRNNFLTRD LVLNADLYAR NQKSDAYQAR TLSLTAGIER QTTLLFQKPW
VFSAGLEAVA TSERDAAAIL AGEPRKTYFV GALPMRAAYD GSDSLLDPTR GFRVGLRLSP
ELSVQDGVKS TYGKVQLDAS YYQPFGESVV MAGRVRLGTI TGTDIENIAP SRRFYAGGGG
SVRGYGYQQI GPRDTLGEPS GGRALTEFSL EARVKTGLFG GAVSVVPFVD AGAVDTSTTP
KFDDLKIGVG VGLRYQTNFG PIRIDVGTPL NPSKGDSRIG VYVALGQAF
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