Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1087 |
Symbol | |
ID | 3916383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1129961 |
End bp | 1130929 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640443822 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_496366 |
Protein GI | 87199109 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) [TIGR01552] prevent-host-death family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCA GCTTGCCAGA CGCCGCGCCC CAGGGCGCCC CGCTCCGCCT CCTGATTGCC GCCCCGCGCG GGTTCTGCGC GGGGGTCGAC CGCGCGATCG AAATCGTCGA GCGCTCGCTC GAACGCTTTG GTGCACCGGT CTACGTCCGG CACGAAATCG TCCACAACCG CTATGTCGTC GACGGGCTCA AGGCCAAGGG CGCGGTCTTC GTCGAGGAAC TGGACCAGGT GCCCGATGGC GCGCCAGTCG TCTTTTCGGC CCACGGCGTG CCCAAGGTCG TGCCCCAGAC CGCGACCGAG CGCGGGCTCG ACTGGCTCGA CGCCACCTGC CCGCTGGTCA GCAAGGTCCA CCGCCAGGCC GAGCGGCAGG TAGAGGCCGG GCGCCATATC CTGTTCGTCG GCCACAAGGG GCACCCCGAA GTGATCGGTA CGATGGGCCA GGTCCCCGAG GGCACGATCT CACTGGTCGA GACGGTCGAG GACGTCGCAG GCCTCGACTT TCCCGAGGGC ACGCCGCTCG CCTTCCTGAC GCAGACCACG CTTTCGGTGG ACGACACGGC AGAGATCGTC GCCGCGCTCC ACACCCGCTT CCCGCAAATC GTCGGGCCCA AGGCAGAGGA CATCTGCTAT GCCACGTCCA ACCGCCAGGC CGCGGTCAAG GCAATCGCGG GCGAGTGCGA CCTGCTGCTG GTGATCGGCG CCCCGAACAG CTCCAACTCG CTGCGGCTGG TCGAAGTGGC TGAACGGCTC GGCACCCGCT CGCGCCTGAT CCAGCGGGCG AGCGAGATCG AACCTGAATG GCTCGATGGC GTCGAAACGC TCGGTCTCAC CGCCGGCGCC TCGGCACCCG AAGTGCTGGT GCGCGAAGTC GTCGCCCGGA TCGCCTCGCT CCGGCCGGTC ACCGAGGAAA CGGTGACCAC GGCCGAAGAG AAGATGGTGT TCAAGCTGCC GCGCCAACTG GTCGACTGA
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Protein sequence | MNASLPDAAP QGAPLRLLIA APRGFCAGVD RAIEIVERSL ERFGAPVYVR HEIVHNRYVV DGLKAKGAVF VEELDQVPDG APVVFSAHGV PKVVPQTATE RGLDWLDATC PLVSKVHRQA ERQVEAGRHI LFVGHKGHPE VIGTMGQVPE GTISLVETVE DVAGLDFPEG TPLAFLTQTT LSVDDTAEIV AALHTRFPQI VGPKAEDICY ATSNRQAAVK AIAGECDLLL VIGAPNSSNS LRLVEVAERL GTRSRLIQRA SEIEPEWLDG VETLGLTAGA SAPEVLVREV VARIASLRPV TEETVTTAEE KMVFKLPRQL VD
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