Gene Saro_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1082 
Symbol 
ID3916378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1126076 
End bp1127068 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content67% 
IMG OID640443817 
Productlysophospholipase L2 
Protein accessionYP_496361 
Protein GI87199104 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCG ACACGGGCAG GCGGATCGAC CGGAGAGCGA TTCCAGCCGA CGCTGTCGAG 
GGGACATGGA CGGCAAGCGA CGGTCATCCG ATACGCCGCA TAGACTGGCC CGGCCATTCC
GAACCGGACG CTCCCACGGC GCCGCGAGGT TCGCTCCTGT TCCTGCCAGG ACGAGGGGAT
TTCTACGAAA AGTATCTGGA ATCCCTGGAT TACTGGCATT GCGAAGGGTG GCGGGTCACC
GCGCTCGACT GGCGAGGGCA AGCTGGCTCC GGTCGGCTTT CGTCGGATCC GATGACAGGG
CATGTTCCCG ATTTCGGGCT GTGGCTGGAC GACCTTGGCG CGTTCTGGAC GGATTGGGTT
CGTGACACGC CCGGTCCCCA TGTGGTCGTG GGCCATTCGA TGGGCGGGCA TCTCGTGCTT
CGCGCCCTCG CCGAGCGCCG GATCGATCCG GCCGCGGTGG TGCTGAGCGC GCCCATGCTC
GGATTCCTGA CACCAGGCCC GAATCGGGTT CTTCACCGGG TGGCCGAGTT CATGTGCCGA
ATCGGCGACC CCGAACGAAG CGCCTGGAAG AGCAGCGAAA AGCCCGGGGC AACCACGGCC
GCGCGCAATA CGCTCCTCAC GCATGACGAG GCCCGTTACG GTGACGAGAC GCACTGGAAG
ACGGTGCGGC CCGAACTTGC AATGGGGCCG GGAAGCTGGC GCTGGGTGGA GCGGGCCTAC
GCCTCGATGC TGGTGCTGGA CAGACCGGGG CTGCTGGAGG CGGTCGACGT GCCGGTGCTT
TTGCTTGCCG CGCGCCATGA CGGGCTCGTT TCCTGGCGCG CGATCGAGCG TGCGGCGCGG
CGCCTGCCGC GCGCGCAACT GATGACCTGG GGCCGCGAGG CAAGGCACGA GTTGCTCCGT
GAGGCCGATC CGGTAAGGGA CAAGGTCATG CACGCCATCG ACGATTTTCT TGACCGCCTT
GCCCCGCCGA CCGGGGAGGA CGCACCCGCG TGA
 
Protein sequence
MDFDTGRRID RRAIPADAVE GTWTASDGHP IRRIDWPGHS EPDAPTAPRG SLLFLPGRGD 
FYEKYLESLD YWHCEGWRVT ALDWRGQAGS GRLSSDPMTG HVPDFGLWLD DLGAFWTDWV
RDTPGPHVVV GHSMGGHLVL RALAERRIDP AAVVLSAPML GFLTPGPNRV LHRVAEFMCR
IGDPERSAWK SSEKPGATTA ARNTLLTHDE ARYGDETHWK TVRPELAMGP GSWRWVERAY
ASMLVLDRPG LLEAVDVPVL LLAARHDGLV SWRAIERAAR RLPRAQLMTW GREARHELLR
EADPVRDKVM HAIDDFLDRL APPTGEDAPA