Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1080 |
Symbol | |
ID | 3916376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1124402 |
End bp | 1125430 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640443815 |
Product | Flp pilus assembly CpaB |
Protein accession | YP_496359 |
Protein GI | 87199102 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGA GGAAGCTGAT GTTGCTGGTG GGGGCGCTGA TCGTAGCGAT CGGCACGGCC TTCGCAGCAA GGAGCCTTTT CGCCGGCAAT TCGACGCCCC AGGCTGAAGC CGCGGCCAAG GTGCCGACCG GCCCCAAGGT CCTCGTGGCG CAGCGCGCGC TTCCGGTCGG CACGATCATC ACAGCCGATT CAATCAACTT CCAGGCCTGG CCCAAGGACA TGGTGCAGGA CGCCTACTTC GTCGAAGGCG AGGCGGACAT GCAGAAGCTG CTCGGCACCG TCGTCCGCAA TCCGATCACG GCGGGCGAAC CGGTGACCAA GGGCAATCTT GTCGCCCCCG GCGACCGCGG CTTCCTCGCT GCTGCTCTCG GTGCCGGCAT GCGCGCCGTC ACCATCCCTG TTTCCGCACG CACCGGCGTT GCCGGCTTCG TCTTCCCGGG CGATCACATC GATCTCGTGC TGACCCAGAC TGTCAAGGGC ACGGGCGAAG GCATGGCGCT CAAGGCGTCG GAGACGATCC TCAAGAACCT GCGCGTCCTT GCCACCGACC AGTCGACCGA ACAGGAACAG GTCGAAGGCA AGACCCGCGT CCGCACCTTC AGCACCGTCA CACTCGAAGT GACGCCCAAG ATCGCCGAGA AGATTGCGGT CGCGCAGACC ATCGGTACGA TCAGCCTCTC GCTGCGCTCG CTGGCCGACA ACTCGGCCGA GCTGGAGCAG GCCATTGCCG CCGGCGACGT CAAGATCCCG GCAGGCGTGA CCAAGCAGCA GGAAGAGGCC CTGCTCCAGC AGGCGATGAA CCGCCCGCTG GGCGGCGGCA AGGACAGCTT CGTCACCGGC GGCGACGTCT CGCGCTTCCA GCGCAAGACC ATGCCCGTCA CGGCACCCGC AGCCGGCATG GGCGCCCCGC AGATGGCAGC CGCCACCGGC CCGCAAATGG CCTCCAACGC TGCCCCCGTT CGCCGCGGCC CGGTCGTCCG TGTGACCCGC GGCAAGGAAA CAGAATCCGT CTCGCTGGGA GGGAACTGA
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Protein sequence | MDKRKLMLLV GALIVAIGTA FAARSLFAGN STPQAEAAAK VPTGPKVLVA QRALPVGTII TADSINFQAW PKDMVQDAYF VEGEADMQKL LGTVVRNPIT AGEPVTKGNL VAPGDRGFLA AALGAGMRAV TIPVSARTGV AGFVFPGDHI DLVLTQTVKG TGEGMALKAS ETILKNLRVL ATDQSTEQEQ VEGKTRVRTF STVTLEVTPK IAEKIAVAQT IGTISLSLRS LADNSAELEQ AIAAGDVKIP AGVTKQQEEA LLQQAMNRPL GGGKDSFVTG GDVSRFQRKT MPVTAPAAGM GAPQMAAATG PQMASNAAPV RRGPVVRVTR GKETESVSLG GN
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