| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1076 |
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| Symbol | |
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| ID | 3916372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1119798 |
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| End bp | 1120772 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640443811 |
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| Product | type II secretion system protein |
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| Protein accession | YP_496355 |
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| Protein GI | 87199098 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.195162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCA TTATCCAGCT TCTGCTGATG TCCACCGGGC TGATGGTGGC GATGGTGCTG
GGCTATGCCG CGCTGTCCGG TCCATCGGCC TCGAAGGAAG TCAACCGGCG CCTCCAGTCG
GTCCGCTTCC GTCACTCGGA AAGTACGCTG GACAAGGTCG AAGCGCAGTA TCGCAAGACG
CTCGCCGCGC GCAAGCCGAA GACCATGAGG CCCGCCGGGT CTTCGTCGCG GCTCGAGGCG
CTCGAACTGC GCCTGCACCG CACCGGCAAG GGCTGGACGC TTTCGCAGTA CCTCTACGTC
AGCGGCGGCC TCGCCATTCT GATCTTCCTG CTGGTGTACC TGCGCACAGG CGCGCCTCTG
CTGGCGCTCG GTTCCGGCAT TTTCATCGGC GGCGGCCTTC CCCACATGCT GGTCGGTCGT
GCGATCAACA AGCGGATCGA CAACTTCGTC ACCCGCCTGC CCGATGCCCT GGACCTGCTG
GTACGCGGCC TGCGCTCGGG CCTGCCCGTC ACCGAAACGC TCGGCGTCGT CGCGGCCGAA
CTGCCGGGCC CGGTGGGCGA GGAGTTCAAG CTGGTGACCG ACCGCATCAA GGTGGGCCGC
ACGATGGAAG AGGCTCTCCA GGACACGGCG GACCGGTTGA ACCTGCCGGA ATTCAACTTC
TTCTGCATCA CGCTGGCGAT CCAGCGCGAG ACGGGCGGCA ACCTCGCGGA AACGCTGTCG
AACCTGTCCG ACGTGCTGCG CAAGCGCGCA CAGATGAAGT TGAAGATCAA GGCGATGAGT
TCGGAATCGA AAGCCTCGGC GTATATCGTC GGCGCCCTGC CCTTCATCGT CTTCGCCCTG
ATCTACTGGA TCAACCCGGT CTATCTCGGA AAGTTCTTTG TGGACGAACG CCTCATCATC
GCCGGCCTTG GCGGCCTGAC CTGGCTCGGT ATCGGAGCCT TCATCATGGC CAAGATGGTC
AGCTTCGAAA TCTGA
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| Protein sequence | MTSIIQLLLM STGLMVAMVL GYAALSGPSA SKEVNRRLQS VRFRHSESTL DKVEAQYRKT
LAARKPKTMR PAGSSSRLEA LELRLHRTGK GWTLSQYLYV SGGLAILIFL LVYLRTGAPL
LALGSGIFIG GGLPHMLVGR AINKRIDNFV TRLPDALDLL VRGLRSGLPV TETLGVVAAE
LPGPVGEEFK LVTDRIKVGR TMEEALQDTA DRLNLPEFNF FCITLAIQRE TGGNLAETLS
NLSDVLRKRA QMKLKIKAMS SESKASAYIV GALPFIVFAL IYWINPVYLG KFFVDERLII
AGLGGLTWLG IGAFIMAKMV SFEI
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