Gene Saro_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1074 
Symbol 
ID3916370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1117707 
End bp1118714 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content66% 
IMG OID640443809 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_496353 
Protein GI87199096 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0872589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTTG CCTCCCTCCC GCAGGGACGG GATGGGCGGC TGATCGTCGT GTCCGACGAC 
CTGGCCTGGT ATGCCGATGC CGACCACATC GTCCCGACGA TGCAGGGTCT GCTGGACGAC 
TGGGACCGGC ATTTCCCGTT GATCGAGGCC TTGGCGATCG AGCTTGCGCA CGAAGCCATT 
CCGCTCAAGC GCTTTCACGA GCGCGAGGCC TGCGCACCCT TGCCGCGCGC CTTCCAGTGG 
GCAGACGGCA GCGCCTATGT GAATCACGTC GAACTGGTGC GGAAGGCGCG TGGGGCGGAG 
CTGCCTGAAA GCTTCTGGAC CGACCCGCTG ATGTATCAGG GCGGCAGCGA CGACATGCGC 
GGCGGGCGCG ATCCCCTCGT ACTGGCGGAC GAAGCCTGGG GTGGGGACTT CGAGGCGGAA 
ATCGTCGTCG TCACCGGCGA CGTGCCCCAG GGCGTCAGCC CCGAAGAAGC GCTGAAGCAT 
ATCCGCCTTG TCGGTCTGGT CAACGACGTG TCGTTGCGCA ATCTCATCCC CGGCGAACTG 
TCCAAGGGCT TCGGCTTCGT CCAGTCCAAG CCGGCCAGTC ACTTTTCCCC GGTCTTCGTG 
ACGCCGGAAA CGCTCGGTGA CGCATGGGCT GGCGGCAGAC TGTCGCAGAC GCTGATGGTC 
GACCTCAACG GCGAGCCGTT CGGGCGCATC GAGGCTGCGG AAGAGTGCAC GTTCGACTTC 
GGCGTGCTGA TCGCGCATCT TGCGAAGACG CGCAGCATCG GGGCCGGTTC GATCATCGGA 
TCGGGCACCG TGTCCAATCG CGATCCCGAC GGTTCGCCAG GACGCCCGGT GGCCCAGGGC 
GGGCGCGGCT ATGCCTGCAT CGCCGAACAG CGCATGGTCG AGACGATCGC ATCGGGCCAG 
CCGTCGACGG CCTTCCTGCG ATGGGGCGAT ACAGTCCGGA TCGAAATGCG CGACGACAAG 
GGCAAGAGCA TCTTCGGCGC CATCGAGCAG ACCGTCGTCC GCCCCTGA
 
Protein sequence
MKLASLPQGR DGRLIVVSDD LAWYADADHI VPTMQGLLDD WDRHFPLIEA LAIELAHEAI 
PLKRFHEREA CAPLPRAFQW ADGSAYVNHV ELVRKARGAE LPESFWTDPL MYQGGSDDMR 
GGRDPLVLAD EAWGGDFEAE IVVVTGDVPQ GVSPEEALKH IRLVGLVNDV SLRNLIPGEL 
SKGFGFVQSK PASHFSPVFV TPETLGDAWA GGRLSQTLMV DLNGEPFGRI EAAEECTFDF 
GVLIAHLAKT RSIGAGSIIG SGTVSNRDPD GSPGRPVAQG GRGYACIAEQ RMVETIASGQ 
PSTAFLRWGD TVRIEMRDDK GKSIFGAIEQ TVVRP