| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1026 |
|---|
| Symbol | |
|---|
| ID | 3915808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1064498 |
|---|
| End bp | 1065496 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640443760 |
|---|
| Product | cytochrome d ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_496305 |
|---|
| Protein GI | 87199048 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC TTACCGTGAT CTGGGCGCTG ATCATCGCCT TTGCCGTCCT GATGTACGTC
GTGATGGATG GCTTCGACCT TGGCATCGGC ATCCTCTTCC CCACATTCGC GCCGGGCCAG
GAGCGCGACC AGGCGATGAA CGCCATCGCC CCCGTCTGGG ACGGCAACGA GACCTGGCTG
GTGCTCGGCG GAGGTGGCCT GTTCGCTGCG TTCCCGCTTG CCTACGCGAT CATCCTTCCC
GCGACCTACC CCCTCATCAT CGCCATGCTC CTGGGCCTCG TGTTCCGCGG CGTGGCGTTC
GAGTTCCGCT GGCGTGACCC GCGCCACCGG GCGTTCTGGG ACATGGCGTT CTTCGCTGGA
TCGCTCGTGG CCGCGCTGGC CCAAGGCATC ACGCTGGGCG CGCTGTTGCA GGGCATCCAC
GTCGAAGGCC GCGCCTATGC CGGCGGCTGG CTCGACTGGC TCTCGCCCTA TTCTCTGCTC
ACCGGGGTCG GCGTCGTCGC GGGCTATGCC CTGCTCGGGT CGACGTGGCT TGCGGTGAAG
GTCGAAGGCA GCGCCGAGGA CAAGGCCTAC GCCCATGCGC GCCGCGCGGC CTGGGCGACG
CTGGCCCTGA TGGCCGCCGT CAGCCTCGCG ACCCCGTTTC TCGCTGGTCA ATACTTCCAG
CGCTGGTTCA CCCAGCCGAT GATCTACTGG CTTGCTCCGG TGCCGCTGGT CACCGGGGCC
GTTGCCTTCG CGCTGATGCG CTCGCTCGGT GCGCGGCATA CGTGGCGGCC CTTCCTGCTC
TCGCTGGCGC TGTTCCTGCT TGGCATGATC GGTCTCGGCG TCTCGATCTG GCCGTGGGTC
GTGCCGCAGA GCATCTCGAT ATGGCAGGCC GCTGCGCCCC ATCGCAGCCA GGTGTTCATG
CTCGTTGGCG TCCTCGCCAT TATGCCGCTG ATCCTGGGGT ATACCGCGTG GGCCTATTGG
GTGTTTCGCG GCAAGGTCGG AACGCATGGC TATCATTGA
|
|---|
| Protein sequence | MIDLTVIWAL IIAFAVLMYV VMDGFDLGIG ILFPTFAPGQ ERDQAMNAIA PVWDGNETWL
VLGGGGLFAA FPLAYAIILP ATYPLIIAML LGLVFRGVAF EFRWRDPRHR AFWDMAFFAG
SLVAALAQGI TLGALLQGIH VEGRAYAGGW LDWLSPYSLL TGVGVVAGYA LLGSTWLAVK
VEGSAEDKAY AHARRAAWAT LALMAAVSLA TPFLAGQYFQ RWFTQPMIYW LAPVPLVTGA
VAFALMRSLG ARHTWRPFLL SLALFLLGMI GLGVSIWPWV VPQSISIWQA AAPHRSQVFM
LVGVLAIMPL ILGYTAWAYW VFRGKVGTHG YH
|
|---|
| |