Gene Saro_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1025 
Symbol 
ID3915807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1063077 
End bp1064498 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content65% 
IMG OID640443759 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_496304 
Protein GI87199047 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCAG GGCTTGATCC ACAAGGAACC GCGCTGGTTC TCGCGCGAAT GCAGTTCGCC 
TTCACGGTGA GCTTTCACTT CATCTTTCCG GCCTTTTCCA TCGGCCTTGC CAGCTACCTC
GCGGTGCTCG AAGCCTTGTG GCTGAAGACG GGCAAGGCGC TCTACCTCGA CCTGTTCCGC
TACTGGCTGA AGATATTCTC GGTGGCCTTC GCGATGGGCG TGGTTTCGGG TCTCGTCATG
TCCTACCAGT TCGGCACCAA CTGGTCGGTC TTCTCCGAAA AGGTGGGCGG CGTGATCGGG
CCGCTGATGG CCTACGAGGT GCTCACCGCC TTCTTCCTCG AAGCCGGGTT CCTCGGCGTC
ATGCTGTTCG GCATGAACCG GGTGGGCAAG CGGCTCCACT TCGCCGCCAC GCTGATGGTG
GCCGTGGGCA CTTTCATCTC GGCCTTCTGG ATCCTCTCGG TCAATTCCTG GATGCAGACG
CCGACTGGCT TCGAGATGGG GCCGAACGGC GAATTCCTGC CGGGGCCGAG CTGGGCCGCG
ATCGTTTTCA ACCCCAGCTT TCCCTACCGC CTCGTCCACA CCGTCATCGC CGCCTATCTG
ACCACCGCCT TCGTCGTCGG AGCGGTCGGC GCGTGGCACC TGCTGCGCGA CCGGGCCAAC
CTCCACGCCC GCAAGATGTT CTCGATGGCC ATGTGGATGG CGGCTCTGGT CGCGCCGGTG
CAGGTGCTGG TGGGCGACAT GCATGGCCTC AACACGCTCG AACACCAGCC CGCGAAGGTC
ATGGCGATGG AGGGGCACTA CCAGTCCCAC CCCGATGGCG CTCCGCTCTA CCTGTTCGGC
ATTCCGGACG ACGCGGCGCA GAAGCTCGAC TACGCGATCG CCATCCCCAA GGCGTCGAGC
CTCATCCTCA AGCACGATCC GAACGCGCCG CTAGCCGGCC TCGATACCAT CGCGCCGGAC
CGGCGCCCGC CGGTATGGAT CGTGTTCTGG TCCTTCCGCA TCATGGTCGG CCTCGGCTTC
CTCATGCTCG GCCTTGGCTT GTGGAGCCTG TTCGCCCGCT TCCGGAAGCG CCTCTACGAC
TGGCCCATGC TCCACCGGAT GGCGCTGCTG ATGGGGCCGT CGGGTTTCGT CGCGGTCATC
GCCGGCTGGG TGACGACCGA GGTCGGCCGC CAGCCCTGGA CCGTCTACGG ACTCCTCACC
ACGGCTGAAT CCGTCAGTCC CATTGCCGCG CCGGCGGTGG CCACCTCGCT TCTGGCGTTC
GTCGTCGTCT ACTTCGCGGT CTTCGGCGTC GGCACATGGT ATCTCCTGCG CCTGATGCAC
GAAGTGCCGC ACCCGCACGA GCCCGGCCCT GAACTCGAAG AGCGCGCGCC GATCCGTTCT
GCCGGCATCA CCCCCGCCCA GCAGCAGGAA GGAGCCGCGT GA
 
Protein sequence
MFAGLDPQGT ALVLARMQFA FTVSFHFIFP AFSIGLASYL AVLEALWLKT GKALYLDLFR 
YWLKIFSVAF AMGVVSGLVM SYQFGTNWSV FSEKVGGVIG PLMAYEVLTA FFLEAGFLGV
MLFGMNRVGK RLHFAATLMV AVGTFISAFW ILSVNSWMQT PTGFEMGPNG EFLPGPSWAA
IVFNPSFPYR LVHTVIAAYL TTAFVVGAVG AWHLLRDRAN LHARKMFSMA MWMAALVAPV
QVLVGDMHGL NTLEHQPAKV MAMEGHYQSH PDGAPLYLFG IPDDAAQKLD YAIAIPKASS
LILKHDPNAP LAGLDTIAPD RRPPVWIVFW SFRIMVGLGF LMLGLGLWSL FARFRKRLYD
WPMLHRMALL MGPSGFVAVI AGWVTTEVGR QPWTVYGLLT TAESVSPIAA PAVATSLLAF
VVVYFAVFGV GTWYLLRLMH EVPHPHEPGP ELEERAPIRS AGITPAQQQE GAA