Gene Saro_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1015 
Symbol 
ID3915797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1055129 
End bp1055581 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content68% 
IMG OID640443749 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_496294 
Protein GI87199037 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.228328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGT CCGTCGGAGG CGGTGGAGGT GGCGGCCGTG GCAGGCGCGG CCGTGGTGGC 
CGTGCCGCGA TGAGCGAGAT CAACGTCACG CCGCTGGTCG ACGTCATGCT GGTGCTGCTG
ATCATCTTCA TGGTCACCGC GCCGATGCTG GCGGCTGGCG TGCCGGTCGA CCTGCCCGAC
AGCAAGGCCG ATCCGCTCGA CCAGCAGCAG GACCAGATCA CCGTCAGCAT CGATGCGCAG
GGCAACGTCT TCCTCGACGA CCAGCAGCTT GCGCCGGGCG AACTGACCGA TCGCCTCGCC
GGGCTCCAGC GCGGGCCCAA GCCGCCTCTT GTCACCCTGC GCGCGGATCG TGTGCTCGAC
TGGGGCCGCG TCGCCGCCGT GATGGGCGAA CTGAACGCGG CGGGGTTCAA GTCGATCTCG
CTGGTCACCA ACAGTTCATC CGCGCCGCAA TAG
 
Protein sequence
MAMSVGGGGG GGRGRRGRGG RAAMSEINVT PLVDVMLVLL IIFMVTAPML AAGVPVDLPD 
SKADPLDQQQ DQITVSIDAQ GNVFLDDQQL APGELTDRLA GLQRGPKPPL VTLRADRVLD
WGRVAAVMGE LNAAGFKSIS LVTNSSSAPQ