Gene Saro_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1013 
Symbol 
ID3915795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1053963 
End bp1054427 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID640443747 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_496292 
Protein GI87199035 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.505536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTGC CCCAGCCGCC CTCCGGCCGT TTCGACGGCA ACGAACACCT CTACGCCGTC 
CGCGTCTACT TCGAAGACAC GGACCTGTCG GGCGTGGTCT ATCATGCCAA CTACCTGCGC
TGGTTCGAAC GCGCCCGGTC CGACATGCTC CGGCTTCTCG GCATAGACCA GCGCGCCGCG
CACGAGGCGG GCGAGGGCGC CTATGCCGTC AGCGAAATGG ACCTGCGTTA CGTCCGCCCC
GCGCGTCTCG ACGACGATGT GCTGATCCGC AGCCACGTGG CCCAACTATC GCCCGCCACA
TGCCGTATCG TGCAGCGTGC GTTCAGGGAC GACACGCTCC TGTGCGAAGC GGAGGTCCGC
GTGGCCTTCG TCGCTCCCAA CGGTCGCCCA CGCCGCCAGC CGCGCGAGTG GGTGGCAGCC
TTCCAGACCA TCACTTCCGC TCCTGAAGGA CCGAATTGCG AATGA
 
Protein sequence
MSLPQPPSGR FDGNEHLYAV RVYFEDTDLS GVVYHANYLR WFERARSDML RLLGIDQRAA 
HEAGEGAYAV SEMDLRYVRP ARLDDDVLIR SHVAQLSPAT CRIVQRAFRD DTLLCEAEVR
VAFVAPNGRP RRQPREWVAA FQTITSAPEG PNCE