Gene Saro_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1003 
Symbolgmk 
ID3915785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp1047044 
End bp1047709 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content66% 
IMG OID640443737 
Productguanylate kinase 
Protein accessionYP_496282 
Protein GI87199025 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGCA ATCCCGCAAA CACCGAGTCC CATGACGACG ACGCCCTGCA CCGCCGGGGC 
CTGATGTTCA TCCTGTCCTC GCCCTCGGGC GCGGGCAAGA CCACCATCGC GCGCAAGCTT 
CTGTCGGAAG ACAGCGAGAT TGCCATGTCG GTTTCGGTAA CGACGCGCCC GATGCGGCCC 
GGCGAAGTTG ACGGCAAGGA CTACTTCTTC GTCGAACCGG CCGAGTTCGA GCGGATGGTG 
GAAGCCAACG AATTCTACGA ATGGGCCACG GTCTTCGGCA ATTGCTACGG CACGCCCAAG 
GCCCACATCC GCGAGCGATT GAAGACCGGC GGCGACGTAC TGTTCGACAT CGACTGGCAG 
GGAACGCAGC AGCTCTACCA GAAGGCGCAG GCCGACGTGG TCCGCGTGTT CATCCTGCCC 
CCCAGCCTCG ACGAACTGCG CCGCCGCCTG ACCGGGCGCG GAACGGACAG CGCGGAAGTG 
ATCGCCGCGC GCATGGACCG CGCGCAGGCG GAGATCAGCC ACTGGGACGG CTACGATTAC 
GTCGTGGTCA ACGACGATGT CGACGGCTGC TTCGGCAAGG TCCGGGAAAT CCTGGCGGCC 
GAGCGCATGC GCCGCACGCG CCAGACAGGG CTGATCGACT TCGTGCGCGG GCTGATGCGG 
GGCTGA
 
Protein sequence
MAGNPANTES HDDDALHRRG LMFILSSPSG AGKTTIARKL LSEDSEIAMS VSVTTRPMRP 
GEVDGKDYFF VEPAEFERMV EANEFYEWAT VFGNCYGTPK AHIRERLKTG GDVLFDIDWQ 
GTQQLYQKAQ ADVVRVFILP PSLDELRRRL TGRGTDSAEV IAARMDRAQA EISHWDGYDY 
VVVNDDVDGC FGKVREILAA ERMRRTRQTG LIDFVRGLMR G