Gene Saro_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1002 
Symbol 
ID3915784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1046149 
End bp1047036 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID640443736 
Productgluconolactonase 
Protein accessionYP_496281 
Protein GI87199024 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.968927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCACA CCGTTCGCAC GCTGGCGGAA GGCCTGACCT TCGGTGAAGG CCCTCGCTGG 
CGGGCGGACG ATCGCGGTGG CCGGCTCTGG TTCTCCGATT TCTTCTCGCA GTCCATCCGC
TCGGTGGGGA TGGACGGCGA CGTCGCGGTG GAGCTTGAGC TGGACGACCG GCCATCCGGC
CTTGGCTGGA TGCCCGATGG CTCTCTGCTG TTCGTTGCCA TGAACAGCAG AGAGGTGCGC
AGGCGCGGGC CTGATGGCAC TGTCGCGTTG CATGCCGACC TTTCCGGCGT CGCCAGCCAC
ACCTGCAACG ACATGGTTGT CGATGCGGAT GGCGGTGCCT GGGTTGGCAA CTTCGGCGTG
GACTTTGCCG AACTCATGCA CCGCTCCTTC GCCGACGTGG CGGCGGACCC GCCGCTTGCC
GACCTCGCCC GCGTCGCACC GGACGGCACG GCTACAGTGG CGGCCAGGGG CATGGCCTTT
GCCAACGGCA GCGTGATTAC CCCGGACGGC AGGACGCTGA TCGTCGCTGA ATCCCTCGGA
CGGCGGCTCA CGGCCTTCGA TATCGCGCCG GACGGTTCGC TGTCGAACCG ACGGACCTGG
GCGGACACGC CGTCGCGCTC TCCCGATGGC ATCGCTCTCG ATGCCGAAGG TGCGGTCTGG
TTCGCGAACG CCTTTGCCGG CGAATGCGTC CGTATTGCCG AAGGCGGAGA GGTGCTGGAC
GTCGTCGAGA CCGGCGCGCG CAACTGCTAC GCCTGCATGC TCGGCGGGCC CGAGGGGCGG
CACCTGTTCA TGCTGGTGGC CGATACGGTG GAACCCGACG CCGGGGTTCT CCCCACGGGC
GCGATTCTGG TGACCGAAGT CGAGGTCTCC CGCGCCGGGC GTCCCTGA
 
Protein sequence
MPHTVRTLAE GLTFGEGPRW RADDRGGRLW FSDFFSQSIR SVGMDGDVAV ELELDDRPSG 
LGWMPDGSLL FVAMNSREVR RRGPDGTVAL HADLSGVASH TCNDMVVDAD GGAWVGNFGV
DFAELMHRSF ADVAADPPLA DLARVAPDGT ATVAARGMAF ANGSVITPDG RTLIVAESLG
RRLTAFDIAP DGSLSNRRTW ADTPSRSPDG IALDAEGAVW FANAFAGECV RIAEGGEVLD
VVETGARNCY ACMLGGPEGR HLFMLVADTV EPDAGVLPTG AILVTEVEVS RAGRP