Gene Saro_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1000 
Symbol 
ID3915782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1044089 
End bp1045228 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content65% 
IMG OID640443734 
Productacyl-CoA dehydrogenase-like 
Protein accessionYP_496279 
Protein GI87199022 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.933298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTTT ACCACACCGA AGACCAGGCC ATGCTGGCCG AAACCGTCAC CGGCTTCATG 
GCCGATGAAG GTGCGATCAA GAAGCAGTTG CGGCACTATC GCGACATGAA TTGCCAGGAC
GGCTTCGGCC ATGCCCTGTG GAAGCAGTTT GCCGAAATGG GCCTGACCGG GATGCTGGCG
TCCGAGGCCG ACGGCGGGCT GGCCATGGGC CATGTCGAGG CGGGTATCGT TCTGCGCGAG
ATTGGCCGCA ACCTCACGCC TTCGCCCTTC CTGACCACTT CGGTCATGGG CGTCACGGCC
CTCTCGGGCG GGTCGGACGA GCTGCGCGGG CGCTGGCTTC CCGGCGTGAT CGCCGGCGAC
AGCGTGCTTG CCGTCGCCAT CGACGAAAGC CCCAAGCACC GACCCGAACG CATCGCCTGC
CGCGCCGAGA AGGCGGGCAA CGGCTTCCGC CTCCAGGGCC GCAAGGCCTT CGTGGTCCAC
GGCGCATCTG CGGACGCGAT CATCGTTGCT GCGCGCACCT CGGGCAGCGA CACCGATGTT
GACGGCATCA CGCTGTTCGC CGTTCCGAAG GATGCGGCCG GCATTGCCCA CGAGAACCTC
CGTCTCGTCG ACAGTACGAT GGCCAGCAAC GTGACCTTCG ACAATGTCGA GCTGGACGGC
GACTGCGTGA TCGGCGAGGT CGATGGCGGG CGCGAACTGC TGAACAGGGT GCTCAACGTC
GGTCGCATCG GCTCAGCCGC TGAAATGACC GGGGTCGGGC AGGGCGCGTT CGACATCACC
ACCGCCTATC TCAAGACGCG CAAGCAGTTC GGCAAGCTGA TCGGGGAATT CCAGGCGCTC
CAGCACCGGG CCGCGCACCT CTACTCCGAG CTGGAGATTG CCGAGGCCGC CGTCATCAAG
GCGCAGCAGC TTCTCGACGG CAATTCCGAA AAGGCGGACC TGATGATCTC GGTCGCCAAG
GCCAAGGCTG GCAAGGCTTG CAACCTGGCA GTGCGCGAGG GTGTGCAGAT GCACGGCGGC
GTGGGCATGA CCGACGAATT CGACATCGGT CTCTACATGA AGCGCGACCG CTCGCTGTCC
GAGTTCATGG GGGACCAGTA CTACCACGCC GAACGGGTCG CGCAGCTCAG CGGATATTGA
 
Protein sequence
MPLYHTEDQA MLAETVTGFM ADEGAIKKQL RHYRDMNCQD GFGHALWKQF AEMGLTGMLA 
SEADGGLAMG HVEAGIVLRE IGRNLTPSPF LTTSVMGVTA LSGGSDELRG RWLPGVIAGD
SVLAVAIDES PKHRPERIAC RAEKAGNGFR LQGRKAFVVH GASADAIIVA ARTSGSDTDV
DGITLFAVPK DAAGIAHENL RLVDSTMASN VTFDNVELDG DCVIGEVDGG RELLNRVLNV
GRIGSAAEMT GVGQGAFDIT TAYLKTRKQF GKLIGEFQAL QHRAAHLYSE LEIAEAAVIK
AQQLLDGNSE KADLMISVAK AKAGKACNLA VREGVQMHGG VGMTDEFDIG LYMKRDRSLS
EFMGDQYYHA ERVAQLSGY