Gene Saro_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0980 
Symbol 
ID3915762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp1023914 
End bp1024417 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID640443714 
Producthypothetical protein 
Protein accessionYP_496259 
Protein GI87199002 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.864504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGCGC CCATCCTCGA AATGGACATC GACCCCGTCT GGGGCGACGC GATCGACTGG 
GAGGACATTG CCAGCCGCGC CGCGGAAGCC GCCGCCAAGG TCGCGCCCGA ACTCGCCCAC 
GAGAACCTGC TGGTCAGTGT CGTCCTGGCC GACGACGACG AGGTCCACGC CCTCAACAAG 
CAATGGCGGG CCAAGGACAA GCCGACCAAC GTCCTGTCCT TCCCCATGCT CAGCCGCGAG 
GAAGTGCTCC ACGCCGCGGC CGACGAAGGC GCGCCCGGCA TGCTTGGCGA CATGATCCTC 
GCCCACGGCG TCTGCACGCG CGAAGCGGCG GAAAAGGGGG TGTCCGTCGA AACCCACGCC 
ACCCACCTCG TCGTGCATGG ATTGCTCCAC CTTGCCGGAT ACGACCACGA GCTTGGCGAG 
GCCGAAGCCG AGGAAATGGA GAATCTGGAG CGGAAGGCGC TTGCGCTCAT GGGCATCGCC 
GACCCATATG CGGTCGAAGA CTGA
 
Protein sequence
MSAPILEMDI DPVWGDAIDW EDIASRAAEA AAKVAPELAH ENLLVSVVLA DDDEVHALNK 
QWRAKDKPTN VLSFPMLSRE EVLHAAADEG APGMLGDMIL AHGVCTREAA EKGVSVETHA 
THLVVHGLLH LAGYDHELGE AEAEEMENLE RKALALMGIA DPYAVED