Gene Saro_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0973 
Symbol 
ID3915755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1018702 
End bp1019349 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content64% 
IMG OID640443707 
ProductTetR family transcriptional regulator 
Protein accessionYP_496252 
Protein GI87198995 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.269206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCATACT ATAATGATCG CCATATAACG GCGAGGTGTT TTACGGACAA GGAGTCTTCG 
GTGCCCAGGA AAAGCGACGC ACGCGCCAAG GCGATTGCCA CTGCGGAACG GCTTTTCTGC 
ACGTCGGGGT ATGCGGCCAC CGGTCTCGCG CGCATCCTTG AGGAGAGCGG CGCACCGAAG 
GGATCGTTCT ATTTCCACTT TCCTCGCGGG AAGGCCGAAC TGGCCGAGGA AGTGATCGAA 
GCCTACCGCG CCCGCACGAC CGCCCTGTTC CGCGTGCTGG TCGAACGGGC GAAGGGTGAC 
CCGCGAGCCT TCGTGACCTC GTTGGCGCAG GGCATCGCTG GCGAGATGGA ACGGTCGGGC 
TGGTCCATGG GCTGCGTGGC GATGGCATTG GCGCAGGAAG TCGCGCCTGC CGATGCGGCG 
CTCACCGACG CATTGGAGCG CGTGTTTGCC GAATGGGCGA GAATTATGGC CGAAGGCATC 
CGGCGTCCGG ACGAGGTGTC CACCGCCGCC GAGGTGCAAA CGCGGGCGCT GGCGCTTCTG 
GCAGCGCTGG AAGGTGCGCG GGTGATTGCC CGGACCATGC GTTCAAGGGA GCCGTTCGAA 
GCCGTGGTCC ACCAGTTTCG CTGTAGCGGA CTCATTCCCA GGGTTTGA
 
Protein sequence
MPYYNDRHIT ARCFTDKESS VPRKSDARAK AIATAERLFC TSGYAATGLA RILEESGAPK 
GSFYFHFPRG KAELAEEVIE AYRARTTALF RVLVERAKGD PRAFVTSLAQ GIAGEMERSG 
WSMGCVAMAL AQEVAPADAA LTDALERVFA EWARIMAEGI RRPDEVSTAA EVQTRALALL 
AALEGARVIA RTMRSREPFE AVVHQFRCSG LIPRV