Gene Saro_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0950 
Symbol 
ID3918036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp996954 
End bp997703 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID640443684 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_496229 
Protein GI229324846 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.696782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCCA CCCCCGCCTG GCCACCGAAG AGCGCACCGC GCCTGTTCGT CGAGATGCCT 
CTCGACCAAG GCATGCGATT GCCGGTTGAC GGCCAGCAGG CACATTACCT GGGCAAGGTC
ATGCGCGTCT CCACCGGCGA CGCGGTGATG CTGTGCGACG ATGCCACGGG AGAGTGGGTT
TCGCGCGTGG CGGAAGTCGG CAAGCGCGAC CTCGTGCTGG AAATCGAACG CCGGACCCGG
CCGCGCGAAG AGGTGCCGGA CTTCTGGCTT TGCGCCGCGC TGCTGAAGAA GCCCAACTTC
GACCTGGTGC TGGAGAAGGC GACCGAACTC GGCGCCGCGC GCGTGGTGCC GGTCGTGACG
CGCCGCTGCG TGGCCGACAA GCTGAACCCC GAGCGTGCGC GAACGATCAT GGTCGAGGCG
GCAGAACAGT GCGCGCGCAC GGCGCTGCCT TCGCTGGGCG AAACCGTCAA GCTCGACCAG
TTGCTGCGAG ACTGGCCGGA AGGGCGAACA CTGTTCTTTG CCGACGAGAA CGGCGGCATT
CCGGCAGCGG CGGCATTCTC GCTCCACTGT GGTCCCGCAG CACTTCTGGT CGGGCCCGAA
GGAGGGTTCG ACGAGACCGA GCGCAGCGCC ATCCGTGCGC ATCCGGCCGC CGTCGGCATC
GCGCTTGGCC CCCGGATCCT GCGGGGCGAG ACGGCATCGA TTGCCGGCAT GGGCCTGTGG
ATGGGTTTGC AGGGCGACTG GTTCGGCTGA
 
Protein sequence
MSATPAWPPK SAPRLFVEMP LDQGMRLPVD GQQAHYLGKV MRVSTGDAVM LCDDATGEWV 
SRVAEVGKRD LVLEIERRTR PREEVPDFWL CAALLKKPNF DLVLEKATEL GAARVVPVVT
RRCVADKLNP ERARTIMVEA AEQCARTALP SLGETVKLDQ LLRDWPEGRT LFFADENGGI
PAAAAFSLHC GPAALLVGPE GGFDETERSA IRAHPAAVGI ALGPRILRGE TASIAGMGLW
MGLQGDWFG