| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0921 |
|---|
| Symbol | |
|---|
| ID | 3918007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 973079 |
|---|
| End bp | 974500 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640443655 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_496200 |
|---|
| Protein GI | 87198943 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.400205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTACG TCAGCACCCG GGGGCAGGCA CCCTCGCTCG ATTTCCAGGG CGTCACGCTC
GCAGGCCTCG CTTCGGATGG CGGGCTCTAC GTGCCCGAGA GCTGGCCGCA GTTCTCGCAC
GACGAGATCG CCGCGATGGC CGGGCTGCCC TATGCCAGGC TGGCGCAGAA GATCATGCAG
CCCTACGTCG GCGATTGCCT GACGCCGGAG CGCCTGCTGG AGCTGTGCGA ACAAGCCTAT
GGCCGTTTCG CGCACGCTGC CGTGACGCCG CTCAAGCAGC TCGACGAGAC GCAGTGGGTG
CTCGAACTGT TCCATGGGCC GACGCTGGCT TTCAAGGACG TCGCGCTCCA GTTGCTTGGC
CTGCTGTTCG AGGAATTCCT TGCGCGTCCG AGAGAGGATG GGGGCGACGA GCACATCACC
ATCGTCGGGG CGACTTCGGG TGACACCGGG TCTGCCGCCA TCGATGCGGT GGCGGGTCGC
GCCAAGGTCG ATATCTTCAT GCTCCACCCG CATGGCCGGG TATCCGATGT GCAGCGCCGC
CAGATGACCA CGGTCATCGC GCCCAACGTC CACAACATCG CCATCGACGG CAGCTTCGAC
GATGCCCAGG CGATGGTGAA GCGCATGTTC AACGACAGCG CGATGACCGG CCGCTTCGGC
ATCGCCGCCG TCAACTCGAT CAACTGGGCG CGCCTGATGG CGCAGGTGGT CTACTACTTC
TACGCCGCGC TCCAGCTTGG CGCGCCGCAC CGCAAGGTTG CCTTCTCGGT GCCGACCGGC
AACTTCGGGG ATGTCTTCGC AGGCTACGTC GCGGCGAAGA TGGGCCTTCC GATCGAGCGG
CTGATCGTGG CCACCAACGT CAACGACATC CTCCACCGCG CGCTTTCGGC AGGCGATTAT
TCGGCCAGCA CCGTAACGCC GACCGCCGCG CCATCGATGG ACATCCAGGT TTCCTCGAAC
TTCGAGCGCC TGCTGTTCGA CGGCTGCGGT CGCGACGCAT CGGCGCTTGC CGCGCAGATG
AAGCATTTCG AAGTGACCAA GGCGATGCAG CTCACGAATG CGCAGCGCGA ATCGGCGGCC
GCGCTGTTCA GCTCCGCTCG CGCCGATGCG GGCGACATGG CCAATGCCAT GCGCTGGGCG
TTCGAGGCGA CGGGCGAAGT GCTCGACCCG CACACCGCGA TTGGCCTTCA CGCGGCACGC
GCGGCCGAAG GCATCCCTGC GGGCGTTCCG ATCGTGACGC TGGCGACGGC CCATCCGGCA
AAGTTCGTCG ACGCGGTCGA GCGCGCCACC GGCGTTCGCC CGGGCCTGCC CGCCCGCGTG
GGCGACCTGT TCGAGCGCGA AGAGCGCTGC GACCGCCTGC CCGGCAACTA CGAAGCGGTT
GCCGCCTACG TCGCCGAGCG CGCGACTCCG AAGCATGGCT GA
|
|---|
| Protein sequence | MKYVSTRGQA PSLDFQGVTL AGLASDGGLY VPESWPQFSH DEIAAMAGLP YARLAQKIMQ
PYVGDCLTPE RLLELCEQAY GRFAHAAVTP LKQLDETQWV LELFHGPTLA FKDVALQLLG
LLFEEFLARP REDGGDEHIT IVGATSGDTG SAAIDAVAGR AKVDIFMLHP HGRVSDVQRR
QMTTVIAPNV HNIAIDGSFD DAQAMVKRMF NDSAMTGRFG IAAVNSINWA RLMAQVVYYF
YAALQLGAPH RKVAFSVPTG NFGDVFAGYV AAKMGLPIER LIVATNVNDI LHRALSAGDY
SASTVTPTAA PSMDIQVSSN FERLLFDGCG RDASALAAQM KHFEVTKAMQ LTNAQRESAA
ALFSSARADA GDMANAMRWA FEATGEVLDP HTAIGLHAAR AAEGIPAGVP IVTLATAHPA
KFVDAVERAT GVRPGLPARV GDLFEREERC DRLPGNYEAV AAYVAERATP KHG
|
|---|
| |