Gene Saro_0880 details

Gene Information

• Locus tag: Saro_0880
• Symbol: mscL
• ID: 3917965
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 934521
• End bp: 934988
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640443613
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_496159
• Protein GI: 87198902
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.0911634
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCACG AAGTGAAGGG GGAGATCCTG GGTATGCTGG GCGAATTCAA GAAATTCATC 
GCACGCGGCA ACGTGCTTGA TCTGGCGGTG GGCGTGATCA TCGGCGGTGC CTTCGGCAAG 
ATCGTCACCT CGCTGACCGA AAGCGTCATC ATGCCGGTCG TCGGGTGGCT GACCGGCGGG 
GTCGACTTCA CCCGCTATTT CGTGCGGCTG GGCCCGGTGC CCGCCGACTT CAAGGGCGAT 
CCGACAAGCT ATGCCGAGCT GAAGGCCGCG GGCGTGCCGA TGATCGGCTA TGGCGATTTC 
ATCACCCAGG CGGTGAATTT CGTGATCGTG GCCTTCATCA TCTTCCTCAT CGTGAAGGCG 
GTGAACCGGA TGTTCGAAAA GCCCGAGGAA GCACCGGCGG CGCCTTCCGG CCCGACCGAG 
GTCGAACTGC TGGCCGAAAT CCGGGACGCG CTGAAGGCCA AGGGCTGA 

 

Protein sequence

MAHEVKGEIL GMLGEFKKFI ARGNVLDLAV GVIIGGAFGK IVTSLTESVI MPVVGWLTGG 
VDFTRYFVRL GPVPADFKGD PTSYAELKAA GVPMIGYGDF ITQAVNFVIV AFIIFLIVKA 
VNRMFEKPEE APAAPSGPTE VELLAEIRDA LKAKG