| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0875 |
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| Symbol | |
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| ID | 3917960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 930813 |
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| End bp | 931592 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640443608 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_496154 |
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| Protein GI | 87198897 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0875261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAGGG TTCAGGGCAA GAAGGCACTC GTCACCGGGG CGGCGCAAGG CCTCGGCGCG
GCACACGCAT GGATGCTGGC GCGCGAAGGC GCCAGGGTGC TGCTCACCGA CATCAACGGC
GAAGGCGCAA CGGCAACGGC TGCGGCAATC AACGCCGAAC TGGGGGCAGG CACGGCTTTC
GCCATGCGCC ATGACGTGAC CAGCGCGGAC GATTGGGACG CGGCAATCGC GTTCGCCGCC
GAGAAGCTCG GCGGGCTTTC GGTCCTGGTC AACAACGCGG GCGTCGGCGT GCGCGGCAAT
ATCGAGACCT GCACGCTGGA AGAATGGCAC CGGGGCTTTG CCATCAACGT CGACAGCGTG
TTCCTGGGTT GCCAGAAGGC GCTGCCGCTG CTGCGCGACA GCCAGCCCGC CTCGATCGTC
AACATCAGCT CGATCGCGGG TCTCATCGCC TCGGACACGA TGCCCGGCTA CAACGCCAGC
AAGGCGGCGG TGTGGATGCT GACCAAGTCG GTCGCGCTGT ACTGCGCCAA GCGCGGCTGG
GACATCCGCT GCAACTCGGT CCACCCGACG TTCGTCGACA CCCCGATCCT CGACGGCATC
AGCGCGAACG CCAATCTGGA AAAGTCGGTG GTCATGGGCA AGCTCGCCCG CCAGATCCCG
CTGGGCCGCG TGGGCGAACC CGACGACATT GCGGCGGGCG TGCTCTACCT CGCCAGCGAC
GAAAGCCGCT TCATGACCGG CGCGGAGCTG AAGCTGGATG GCGGCATCTC GGCGATGTGA
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| Protein sequence | MGRVQGKKAL VTGAAQGLGA AHAWMLAREG ARVLLTDING EGATATAAAI NAELGAGTAF
AMRHDVTSAD DWDAAIAFAA EKLGGLSVLV NNAGVGVRGN IETCTLEEWH RGFAINVDSV
FLGCQKALPL LRDSQPASIV NISSIAGLIA SDTMPGYNAS KAAVWMLTKS VALYCAKRGW
DIRCNSVHPT FVDTPILDGI SANANLEKSV VMGKLARQIP LGRVGEPDDI AAGVLYLASD
ESRFMTGAEL KLDGGISAM
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