Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0873 |
Symbol | |
ID | 3917958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 928492 |
End bp | 929379 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640443606 |
Product | LysR family transcriptional regulator |
Protein accession | YP_496152 |
Protein GI | 87198895 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.155303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATC GCTGGGACGG GATAGACGAG GTCGTGGCAG TGGCCGATAC CGGCACTTTC GTGGCCGGGG CCAAACGGCT CGGAACCTCC ACATCGCACG TCAGCCGGGC GGTCGCGCGG CTCGAACAGA GCCTCGGCGC GCAGTTGTTC CACCGCACCA CCCGCGCCGT CAGCATGACC GATACCGGGC GCATGCTGGT CGACCAGTTC CGCCGCCTGA TCGCAGAGCG CGACGAGGCC ATCGCGATGC TCGATCTCCA GGGCGAGCCG CAGGGGCAGC TTCGCATCAC CTGCCCCACC GCGCTGGGCG AGCGGTTCGT CGCGCCCATC GTGCGGGCCT ATGTGCAGGA ATATCCCAAG CTCTCGGTCG ACCTCGACAT GTCGAACCGC GTGGTCGAAC TGGTCTCCGA AGGCTACGAC CTTGCCATCC GCACCGGCAC CCTGCCCGAC AGCCGCCTGA TCCGCACGCA GATCGCGACG CGCGGCATCG TCACCTGCGC CGCGCCTTCC TATCTGGAAG AGCGCGGGAC GCCGCAGACG GTGGACGACC TGCTTGGCCA CGAGTGCATC CCCGCGACGT CCGACGTGTG GCGCTACCGC GTGGACGGCG AGCAGCGGAC CATCCGGCCC CGGGGACGCT GGCGTTGCAG CAACGGCGCG GCGGTGTTCG ACGCGGCGGT GGCCGGCATG GGCCTGTGCC AGCTGCCCGC CTTCTACGTG AACAGGGCCA TCGCCGCCGG TCAGCTCGTC CCGGTGCTGG ACGAGTTCCG GCCCGAGGAC GACCCGATCT GGGCAGTCTA CCCGCAGCGC CGCCATCTCC TCCCCAAGGT GCAGCGGCTG ATCGAGAAGC TGCGCCGCGA GTTGCCGACC GCGCTTCTGG CAGGCTGA
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Protein sequence | MSNRWDGIDE VVAVADTGTF VAGAKRLGTS TSHVSRAVAR LEQSLGAQLF HRTTRAVSMT DTGRMLVDQF RRLIAERDEA IAMLDLQGEP QGQLRITCPT ALGERFVAPI VRAYVQEYPK LSVDLDMSNR VVELVSEGYD LAIRTGTLPD SRLIRTQIAT RGIVTCAAPS YLEERGTPQT VDDLLGHECI PATSDVWRYR VDGEQRTIRP RGRWRCSNGA AVFDAAVAGM GLCQLPAFYV NRAIAAGQLV PVLDEFRPED DPIWAVYPQR RHLLPKVQRL IEKLRRELPT ALLAG
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