Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0866 |
Symbol | |
ID | 3917951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 918006 |
End bp | 920645 |
Gene Length | 2640 bp |
Protein Length | 879 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640443599 |
Product | TonB-dependent receptor |
Protein accession | YP_496145 |
Protein GI | 87198888 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.250778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTG CAGATACCAT CCGCACGTCT GCCTCGCTCG CGGCCCTGGC GGTTGCCGCG CTTGCCGCGC CGGCTCTCGC GCAGGACAGC GCACAAGCCG ATGGAGCCGC TGCGGCCGAC AACCAGATTG TCGTGACCGG CGTGTTCAGC GCGAAATCGA TCGAAAATGC GCCGATCTCG ATTTCGGCGG TGACTGCGGA AGAACTCTCG CAGCAGATCG CCAACAGCTC GGCCGACCTC ATCAGGAACG TCCCGGGCGT TTTCGTGAAC TCCTCGCTGG GCGAGATCCG CAACGTCGTC TTCTCGCGCG GCGTTTCGGC CAACTCGCTC GATGGCGATG GCGGCTACTA CTACGTCTCG ATGCAGGAAG ATGGCCTGCC GGTGGAACCG ATCACCTCGG GCAACTTCGG TCCGGACTAC TTCTCGCGCC CCGACATCAT GCTCGACCGG CTCGAGGGCC TGCGCGGCGG CACCGCCACT GTCACCGGTA ACAACGCGCC GGGCGGCATC TTCAACTACA TCTCGCGGAC CGGAAAGTCG CACCCCGGCT TCGAAGTCCA GGGCAAGCTC GGCCTCGAAG GCGACGGCAA GAACCCGTAC TACCGCGTCG ACGCCTATGC CGGCGGCGAA GTGGGCAATG GCCTCTATTA TGCCATCGGC GGCTTCTACC GGAAGAGCGA CGGCTCGCGC GATCCCGGCT ATGCGCTGAA CAAGGGCGGC CAGATCCGCG CCAATCTGCT GTGGGACTAT GGCAACGGTT CGGTCCGCTT CGACGCCAAG TACCTCAATG ACCACAACGG CTGGTTCGAG TTCACCCCGG CGTTCAACTA CGACGATCCC AAGATCGCCG CCGGTTTCGA CAACACTTCG TCGGTGCTGC CGCCGGCCAA TGCCCACAGC TTCACCAACC CCGATGGATC GACCGGATCG TGGGATGCCT CGGACCTCGT CCACGCCCGC ACGCTTTCGT TCGGCATGAC CTGGGACCAC GAACTGGCTG ACGGCATCAA GGTCCAGAAT CGCGCGCGCT ACAGCGAGAA CAAGACCGAC TGGAGCACCG GCGGCCTGAT CTTCCCGCTC GGCGTCGACG ACTTCTTCCT GTCGATCCTG ACCGGCACGC TCGGCCTGCC CGGCACCACC ACCTACAAGG TGCGCGGCAC GGACCAGGTC GCGGCCGAGG TCTTCTCGTT CTCGGGCTTC GACCACAGCG TGGTGACCAA CAACCTGCCC AACCAGCACA TCCTCGAGAA CGGCGTGCTG TCGCAGGCCG CGCTTTCGAC CAAGTACCGT TCGCGCAGTT TCCAGGACCA GTTCACGCTT TCGGCCAGCC TCGGCGACCA CTCGCTCGCC GCCGGCGCCT CGTTCGCGCA CTCGCGCTAC AGCCAGGCCA ACGGCGCGGC GGGCATCGGC GTCTCGGCGC TCACGCCCAC CCCGCAGGTC TATGACATCA CCCACACCCT GCCCGACGGC ACCGTGCTGC AGGTGACCGA CCCGGCCGGC TTTGCCGCGC AGGGCGGCGG CCTGCTCGAT GGCGATGGCG TGCGCGGCAC CCAGCGCCAG ATCTCGGTCT TCGCGGGCGA CGAATGGCAG GTGACCGATC GCCTTTCGGT CGACGGCGGC ATCCGCTACG AGGACATCCG CTACGATATC ACCAACCTCA CCCTTGGTGC GGCGGTGGCG GTCAACGGCG GCGGCGGGGC CGATGGCAAC CCGCTGACGC TGTGGGACAA CACCCGCAAC ACCTATGGCG CGCCGACCAA CACGAAGCGC AACTTCCACT ACCTCAACTA CACCGGCGCG GTGAACTACG AGGTCAGCGA CAATTTCCAG GCCTATGTCC GCTATACCCG CGGCAAGAAG GCCCCGGACT TCCGCGGCAT CGCCGATATC GACACGCCCA GCGAAATCTC CACGCAGTTT CCCGAACCGC AGGTCATCAC GCAGGTCGAG GTTGGCCTGA AGTACCGTCA GGACAACCTG CGGGTCGCGC TGTTCCCGTT CTACTCGAAG CTGTCGAATG TCGGCTCGAC CCAGACCTTC ACCGACGAGA ACGGCAAGTT CTACACGCCG CCGACGGTCT ATGGCCAGAT CGAGACCTAT GGCGTCGAGA TCGATGCCGA TGCCGACATC GGCTCGATGC TGAACCTCCG CACCGCGATC ACGTTGCAGA ACCCCAAGGC CTCGAAGTTC GGCCTTTGGA TCGCCAACGA CCCGGGCTCG GCGGACGACG AGCTTCAGTC GACCCCCAAG GGCGATGCCG ACAACAACCC GAAGATCCTG ACCCGCACCA CTGCCACGCT GACGCCGGTT GACAGCCTCT CGCTGTTCCT CACGCACAGC TACACCGGCA AGCGCGCCGC CAACCGTGCG AACGCCTGGT ATCTTCCCGG CTTCCACACC TTCGATTTCG GCGCGGCCTA CGAGTTCGGT CCGGACAAGC GGTTCAAGTT GCAGGCGAAC GTGAACAACG TGTTCAATCA GTTCGGCATC ATGTCGTGGG CGCGCTCGGG CGGTTTCCTC GCCTCGCTCG ACCGCCAGGG GCTGACGAAG GAAGCCGTCG CGGCCGATCC GAACCAGCTT CTCAGCATCG TCGCGGTCCA GCCGCGCTCG TTCTGGTTGA CCGGTACGGT CAAGTTCTGA
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Protein sequence | MKFADTIRTS ASLAALAVAA LAAPALAQDS AQADGAAAAD NQIVVTGVFS AKSIENAPIS ISAVTAEELS QQIANSSADL IRNVPGVFVN SSLGEIRNVV FSRGVSANSL DGDGGYYYVS MQEDGLPVEP ITSGNFGPDY FSRPDIMLDR LEGLRGGTAT VTGNNAPGGI FNYISRTGKS HPGFEVQGKL GLEGDGKNPY YRVDAYAGGE VGNGLYYAIG GFYRKSDGSR DPGYALNKGG QIRANLLWDY GNGSVRFDAK YLNDHNGWFE FTPAFNYDDP KIAAGFDNTS SVLPPANAHS FTNPDGSTGS WDASDLVHAR TLSFGMTWDH ELADGIKVQN RARYSENKTD WSTGGLIFPL GVDDFFLSIL TGTLGLPGTT TYKVRGTDQV AAEVFSFSGF DHSVVTNNLP NQHILENGVL SQAALSTKYR SRSFQDQFTL SASLGDHSLA AGASFAHSRY SQANGAAGIG VSALTPTPQV YDITHTLPDG TVLQVTDPAG FAAQGGGLLD GDGVRGTQRQ ISVFAGDEWQ VTDRLSVDGG IRYEDIRYDI TNLTLGAAVA VNGGGGADGN PLTLWDNTRN TYGAPTNTKR NFHYLNYTGA VNYEVSDNFQ AYVRYTRGKK APDFRGIADI DTPSEISTQF PEPQVITQVE VGLKYRQDNL RVALFPFYSK LSNVGSTQTF TDENGKFYTP PTVYGQIETY GVEIDADADI GSMLNLRTAI TLQNPKASKF GLWIANDPGS ADDELQSTPK GDADNNPKIL TRTTATLTPV DSLSLFLTHS YTGKRAANRA NAWYLPGFHT FDFGAAYEFG PDKRFKLQAN VNNVFNQFGI MSWARSGGFL ASLDRQGLTK EAVAADPNQL LSIVAVQPRS FWLTGTVKF
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