Gene Saro_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0866 
Symbol 
ID3917951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp918006 
End bp920645 
Gene Length2640 bp 
Protein Length879 aa 
Translation table11 
GC content65% 
IMG OID640443599 
ProductTonB-dependent receptor 
Protein accessionYP_496145 
Protein GI87198888 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.250778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTG CAGATACCAT CCGCACGTCT GCCTCGCTCG CGGCCCTGGC GGTTGCCGCG 
CTTGCCGCGC CGGCTCTCGC GCAGGACAGC GCACAAGCCG ATGGAGCCGC TGCGGCCGAC
AACCAGATTG TCGTGACCGG CGTGTTCAGC GCGAAATCGA TCGAAAATGC GCCGATCTCG
ATTTCGGCGG TGACTGCGGA AGAACTCTCG CAGCAGATCG CCAACAGCTC GGCCGACCTC
ATCAGGAACG TCCCGGGCGT TTTCGTGAAC TCCTCGCTGG GCGAGATCCG CAACGTCGTC
TTCTCGCGCG GCGTTTCGGC CAACTCGCTC GATGGCGATG GCGGCTACTA CTACGTCTCG
ATGCAGGAAG ATGGCCTGCC GGTGGAACCG ATCACCTCGG GCAACTTCGG TCCGGACTAC
TTCTCGCGCC CCGACATCAT GCTCGACCGG CTCGAGGGCC TGCGCGGCGG CACCGCCACT
GTCACCGGTA ACAACGCGCC GGGCGGCATC TTCAACTACA TCTCGCGGAC CGGAAAGTCG
CACCCCGGCT TCGAAGTCCA GGGCAAGCTC GGCCTCGAAG GCGACGGCAA GAACCCGTAC
TACCGCGTCG ACGCCTATGC CGGCGGCGAA GTGGGCAATG GCCTCTATTA TGCCATCGGC
GGCTTCTACC GGAAGAGCGA CGGCTCGCGC GATCCCGGCT ATGCGCTGAA CAAGGGCGGC
CAGATCCGCG CCAATCTGCT GTGGGACTAT GGCAACGGTT CGGTCCGCTT CGACGCCAAG
TACCTCAATG ACCACAACGG CTGGTTCGAG TTCACCCCGG CGTTCAACTA CGACGATCCC
AAGATCGCCG CCGGTTTCGA CAACACTTCG TCGGTGCTGC CGCCGGCCAA TGCCCACAGC
TTCACCAACC CCGATGGATC GACCGGATCG TGGGATGCCT CGGACCTCGT CCACGCCCGC
ACGCTTTCGT TCGGCATGAC CTGGGACCAC GAACTGGCTG ACGGCATCAA GGTCCAGAAT
CGCGCGCGCT ACAGCGAGAA CAAGACCGAC TGGAGCACCG GCGGCCTGAT CTTCCCGCTC
GGCGTCGACG ACTTCTTCCT GTCGATCCTG ACCGGCACGC TCGGCCTGCC CGGCACCACC
ACCTACAAGG TGCGCGGCAC GGACCAGGTC GCGGCCGAGG TCTTCTCGTT CTCGGGCTTC
GACCACAGCG TGGTGACCAA CAACCTGCCC AACCAGCACA TCCTCGAGAA CGGCGTGCTG
TCGCAGGCCG CGCTTTCGAC CAAGTACCGT TCGCGCAGTT TCCAGGACCA GTTCACGCTT
TCGGCCAGCC TCGGCGACCA CTCGCTCGCC GCCGGCGCCT CGTTCGCGCA CTCGCGCTAC
AGCCAGGCCA ACGGCGCGGC GGGCATCGGC GTCTCGGCGC TCACGCCCAC CCCGCAGGTC
TATGACATCA CCCACACCCT GCCCGACGGC ACCGTGCTGC AGGTGACCGA CCCGGCCGGC
TTTGCCGCGC AGGGCGGCGG CCTGCTCGAT GGCGATGGCG TGCGCGGCAC CCAGCGCCAG
ATCTCGGTCT TCGCGGGCGA CGAATGGCAG GTGACCGATC GCCTTTCGGT CGACGGCGGC
ATCCGCTACG AGGACATCCG CTACGATATC ACCAACCTCA CCCTTGGTGC GGCGGTGGCG
GTCAACGGCG GCGGCGGGGC CGATGGCAAC CCGCTGACGC TGTGGGACAA CACCCGCAAC
ACCTATGGCG CGCCGACCAA CACGAAGCGC AACTTCCACT ACCTCAACTA CACCGGCGCG
GTGAACTACG AGGTCAGCGA CAATTTCCAG GCCTATGTCC GCTATACCCG CGGCAAGAAG
GCCCCGGACT TCCGCGGCAT CGCCGATATC GACACGCCCA GCGAAATCTC CACGCAGTTT
CCCGAACCGC AGGTCATCAC GCAGGTCGAG GTTGGCCTGA AGTACCGTCA GGACAACCTG
CGGGTCGCGC TGTTCCCGTT CTACTCGAAG CTGTCGAATG TCGGCTCGAC CCAGACCTTC
ACCGACGAGA ACGGCAAGTT CTACACGCCG CCGACGGTCT ATGGCCAGAT CGAGACCTAT
GGCGTCGAGA TCGATGCCGA TGCCGACATC GGCTCGATGC TGAACCTCCG CACCGCGATC
ACGTTGCAGA ACCCCAAGGC CTCGAAGTTC GGCCTTTGGA TCGCCAACGA CCCGGGCTCG
GCGGACGACG AGCTTCAGTC GACCCCCAAG GGCGATGCCG ACAACAACCC GAAGATCCTG
ACCCGCACCA CTGCCACGCT GACGCCGGTT GACAGCCTCT CGCTGTTCCT CACGCACAGC
TACACCGGCA AGCGCGCCGC CAACCGTGCG AACGCCTGGT ATCTTCCCGG CTTCCACACC
TTCGATTTCG GCGCGGCCTA CGAGTTCGGT CCGGACAAGC GGTTCAAGTT GCAGGCGAAC
GTGAACAACG TGTTCAATCA GTTCGGCATC ATGTCGTGGG CGCGCTCGGG CGGTTTCCTC
GCCTCGCTCG ACCGCCAGGG GCTGACGAAG GAAGCCGTCG CGGCCGATCC GAACCAGCTT
CTCAGCATCG TCGCGGTCCA GCCGCGCTCG TTCTGGTTGA CCGGTACGGT CAAGTTCTGA
 
Protein sequence
MKFADTIRTS ASLAALAVAA LAAPALAQDS AQADGAAAAD NQIVVTGVFS AKSIENAPIS 
ISAVTAEELS QQIANSSADL IRNVPGVFVN SSLGEIRNVV FSRGVSANSL DGDGGYYYVS
MQEDGLPVEP ITSGNFGPDY FSRPDIMLDR LEGLRGGTAT VTGNNAPGGI FNYISRTGKS
HPGFEVQGKL GLEGDGKNPY YRVDAYAGGE VGNGLYYAIG GFYRKSDGSR DPGYALNKGG
QIRANLLWDY GNGSVRFDAK YLNDHNGWFE FTPAFNYDDP KIAAGFDNTS SVLPPANAHS
FTNPDGSTGS WDASDLVHAR TLSFGMTWDH ELADGIKVQN RARYSENKTD WSTGGLIFPL
GVDDFFLSIL TGTLGLPGTT TYKVRGTDQV AAEVFSFSGF DHSVVTNNLP NQHILENGVL
SQAALSTKYR SRSFQDQFTL SASLGDHSLA AGASFAHSRY SQANGAAGIG VSALTPTPQV
YDITHTLPDG TVLQVTDPAG FAAQGGGLLD GDGVRGTQRQ ISVFAGDEWQ VTDRLSVDGG
IRYEDIRYDI TNLTLGAAVA VNGGGGADGN PLTLWDNTRN TYGAPTNTKR NFHYLNYTGA
VNYEVSDNFQ AYVRYTRGKK APDFRGIADI DTPSEISTQF PEPQVITQVE VGLKYRQDNL
RVALFPFYSK LSNVGSTQTF TDENGKFYTP PTVYGQIETY GVEIDADADI GSMLNLRTAI
TLQNPKASKF GLWIANDPGS ADDELQSTPK GDADNNPKIL TRTTATLTPV DSLSLFLTHS
YTGKRAANRA NAWYLPGFHT FDFGAAYEFG PDKRFKLQAN VNNVFNQFGI MSWARSGGFL
ASLDRQGLTK EAVAADPNQL LSIVAVQPRS FWLTGTVKF